Factsheet for Zm00001d050251_P002

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES13774	Sorghum	mitochondrion	79.8	93.64
TraesCS7D01G286500.1	Wheat	mitochondrion	75.12	88.41
TraesCS7A01G293200.1	Wheat	mitochondrion	74.63	87.83
TraesCS7B01G185900.1	Wheat	mitochondrion	74.38	87.54
HORVU7Hr1G063510.5	Barley	mitochondrion	73.65	86.42
Os08t0386700-01	Rice	mitochondrion	72.91	86.3
Zm00001d032267_P003	Maize	mitochondrion	79.06	79.06
GSMUA_Achr4P00940_001	Banana	mitochondrion	59.85	72.11
KRH53422	Soybean	mitochondrion	53.94	63.85
KRH64518	Soybean	mitochondrion	53.94	63.85
PGSC0003DMT400032067	Potato	cytosol, mitochondrion	49.01	63.58
VIT_02s0025g01010.t01	Wine grape	mitochondrion	53.2	63.34
VIT_16s0050g02460.t01	Wine grape	mitochondrion	52.71	62.57
Solyc08g081920.2.1	Tomato	nucleus	51.72	61.22
PGSC0003DMT400023412	Potato	mitochondrion	51.48	59.54
KRH27862	Soybean	mitochondrion	50.0	59.18
AT5G53340.1	Thale cress	mitochondrion	48.28	57.99
Bra003064.1-P	Field mustard	mitochondrion	47.54	57.96
CDX96213	Canola	mitochondrion	47.78	57.91
CDY14386	Canola	mitochondrion	48.03	57.52
CDY35642	Canola	mitochondrion	47.78	57.4
CDY49171	Canola	mitochondrion	46.8	56.72
Bra022647.1-P	Field mustard	mitochondrion	46.55	46.9
Zm00001d045146_P002	Maize	plasma membrane	37.19	42.78
Zm00001d016891_P001	Maize	plasma membrane	33.25	33.92
Zm00001d053825_P002	Maize	golgi	33.0	33.33
Zm00001d014361_P001	Maize	golgi	32.76	31.89
Zm00001d020692_P002	Maize	golgi, mitochondrion	31.77	31.16
Zm00001d013804_P003	Maize	golgi, plastid, vacuole	31.28	30.53
Zm00001d012234_P002	Maize	mitochondrion	31.77	30.5
Zm00001d000099_P003	Maize	golgi	31.28	30.09
Zm00001d045297_P001	Maize	plastid	16.5	26.17
Zm00001d036240_P003	Maize	plastid	22.41	25.07
Zm00001d009997_P001	Maize	plasma membrane	21.67	23.47
Zm00001d035090_P002	Maize	mitochondrion	24.38	22.15

Protein Annotations

EntrezGene:100217131	Gene3D:3.90.550.50	MapMan:35.1	UniProt:A0A1D6Q0M8	ProteinID:AQK52196.1	ncoils:Coil
InterPro:DUF4094	GO:GO:0000139	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005794	GO:GO:0005975	GO:GO:0006464	GO:GO:0006486
GO:GO:0008150	GO:GO:0008152	GO:GO:0008378	GO:GO:0009058	GO:GO:0009987	GO:GO:0016020
GO:GO:0016021	GO:GO:0016740	GO:GO:0016757	GO:GO:0019538	InterPro:Glyco_trans_31	PFAM:PF01762
PFAM:PF13334	PANTHER:PTHR11214	PANTHER:PTHR11214:SF224	TMHMM:TMhelix	UniParc:UPI000843D529	EnsemblPlantsGene:Zm00001d050251
EnsemblPlants:Zm00001d050251_P002	EnsemblPlants:Zm00001d050251_T002	SEG:seg	:	:	:

Description

Hydroxyproline O-galactosyltransferase HPGT1

Coordinates

chr4:+:76390366..76395911

Molecular Weight (calculated)

45285.5 Da

IEP (calculated)

7.177

GRAVY (calculated)

-0.109

Length

406 amino acids

Sequence
(BLAST)

001: MQIREGPARR QAPSAAGALR SPLSAMMLAM FATMASFYVA GRLWQDAQNR VYLIKELDRR TGQGQSAISV DDTLKVVACR QQGKRLASLE MELAAAKHEG
101: FVGKYTPETN GTHSGKKPLV VIGIMTSFGR KNYRDAVRKS WLPTGSMLKK LEEEKGIVVR FVVGRSANRG DTFDREIDDE NRSTKDFLIL VSLIEQLILH
201: YYVDGFNDNI VLCIFYALCL MLIEDSFTLV VLVYPYMCTV ALQDDHIESD EELPKKTKSF FANAANTFDA AFYAKVNDDI YINVDTLSAM LETHWDKPRV
301: YIGCMKSGEV FSDSDPLETE PTSGMNQTGG NLVMGNRKYF RHASSEMFVI SRAIAQFISI NKSVLRTYAH DDVSVGSWMI GLAVKHVNEA KLCCSSWPSG
401: AMCSAL

Best Arabidopsis Sequence Match ( AT2G25300.1 )
(BLAST)

001: MESLPTTVPS KSERRARSSK FSQSSSKPSV IMAFFSCVAW LYVAGRLWQD AENRVVLNNI LKKSYDQKPK VLTVDDKLMV LGCKDLERRI VETEMELTLA
101: KSQGYLKNLK SGSSSGKKLL AVIGVYSGFG SHLRRNTFRG SYMPQGDALR KLEERGIVIR FVIGRSPNRG DSLDRKIDEE NQARKDFLIL ENHEEAQEEL
201: AKKVKFFFSA AVQNWDAEFY IKVDDNIDLD LEGLIGLLES RRGQDAAYIG CMKSGEVVAE EGGKWYEPEW WKFGDEKSYF RHAAGSLLIL SKTLAQYVNI
301: NSGSLKTYAF DDTSIGSWMI GVQATYIDDN RLCCSSIRQD KVCSVA

Arabidopsis Description

HPGT3Hydroxyproline O-galactosyltransferase HPGT3 [Source:UniProtKB/Swiss-Prot;Acc:Q5XEZ1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.