Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 4
- golgi 3
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY14386 | Canola | mitochondrion | 93.79 | 93.51 |
| CDY35642 | Canola | mitochondrion | 93.49 | 93.49 |
| Bra003064.1-P | Field mustard | mitochondrion | 91.72 | 93.09 |
| CDX96213 | Canola | mitochondrion | 91.72 | 92.54 |
| CDY49171 | Canola | mitochondrion | 91.42 | 92.24 |
| Bra022647.1-P | Field mustard | mitochondrion | 89.64 | 75.19 |
| KRH64518 | Soybean | mitochondrion | 71.01 | 69.97 |
| KRH53422 | Soybean | mitochondrion | 70.71 | 69.68 |
| GSMUA_Achr4P00940_001 | Banana | mitochondrion | 67.75 | 67.95 |
| VIT_16s0050g02460.t01 | Wine grape | mitochondrion | 67.16 | 66.37 |
| PGSC0003DMT400023412 | Potato | mitochondrion | 64.79 | 62.39 |
| Os08t0386700-01 | Rice | mitochondrion | 61.54 | 60.64 |
| EES13774 | Sorghum | mitochondrion | 61.54 | 60.12 |
| HORVU7Hr1G063510.5 | Barley | mitochondrion | 60.65 | 59.25 |
| TraesCS7A01G293200.1 | Wheat | mitochondrion | 60.35 | 59.13 |
| TraesCS7D01G286500.1 | Wheat | mitochondrion | 60.35 | 59.13 |
| TraesCS7B01G185900.1 | Wheat | mitochondrion | 59.47 | 58.26 |
| Zm00001d050251_P002 | Maize | mitochondrion | 57.99 | 48.28 |
| Zm00001d032267_P003 | Maize | mitochondrion | 54.73 | 45.57 |
| AT4G32120.1 | Thale cress | golgi, nucleus, peroxisome | 41.42 | 40.58 |
| AT2G25300.1 | Thale cress | plastid | 41.42 | 40.46 |
| AT1G11730.1 | Thale cress | golgi, mitochondrion | 39.65 | 34.9 |
| AT1G77810.1 | Thale cress | golgi | 39.35 | 34.37 |
| AT2G32430.1 | Thale cress | golgi | 41.42 | 34.23 |
| AT1G05170.2 | Thale cress | cytosol, golgi | 41.12 | 34.15 |
| AT4G26940.1 | Thale cress | endoplasmic reticulum, golgi | 40.53 | 33.66 |
| AT1G32930.1 | Thale cress | golgi | 39.05 | 33.08 |
| AT1G33430.2 | Thale cress | golgi, vacuole | 39.35 | 33.0 |
| AT1G22015.1 | Thale cress | golgi | 36.39 | 30.9 |
| AT2G26100.1 | Thale cress | plastid | 25.74 | 23.45 |
| AT3G14960.1 | Thale cress | mitochondrion | 23.37 | 23.03 |
| AT1G53290.1 | Thale cress | mitochondrion | 23.08 | 22.61 |
Protein Annotations
| MapMan:18.1.2.1.2 | EntrezGene:835415 | ProteinID:AED96341.1 | ProteinID:AED96342.1 | EMBL:AF386942 | ArrayExpress:AT5G53340 |
| EnsemblPlantsGene:AT5G53340 | RefSeq:AT5G53340 | TAIR:AT5G53340 | RefSeq:AT5G53340-TAIR-G | EnsemblPlants:AT5G53340.1 | TAIR:AT5G53340.1 |
| EMBL:AY081533 | Unigene:At.19882 | ProteinID:BAB09796.1 | ncoils:Coil | InterPro:DUF4094 | GO:GO:0000139 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005768 | GO:GO:0005794 | GO:GO:0005802 | GO:GO:0005975 | GO:GO:0006464 | GO:GO:0006486 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008378 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0010405 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016740 | GO:GO:0016757 | GO:GO:0018258 | GO:GO:0019538 |
| GO:GO:1990714 | InterPro:Glyco_trans_31 | EMBL:KJ138642 | RefSeq:NP_001032067.1 | RefSeq:NP_568791.1 | PFAM:PF01762 |
| PFAM:PF13334 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 |
| PO:PO:0001017 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 |
| PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 |
| PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 |
| PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 |
| PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PANTHER:PTHR11214 | PANTHER:PTHR11214:SF224 | UniProt:Q94F27 |
| TMHMM:TMhelix | UniParc:UPI000009ED2C | UniProt:W8PUB4 | SEG:seg | : | : |
Description
HPTG1Hydroxyproline O-galactosyltransferase HPGT1 [Source:UniProtKB/Swiss-Prot;Acc:Q94F27]
Coordinates
chr5:-:21640809..21643562
Molecular Weight (calculated)
37770.0 Da
IEP (calculated)
8.444
GRAVY (calculated)
-0.257
Length
338 amino acids
Sequence
(BLAST)
(BLAST)
001: MARKGSSIRL SSSRISTLLL FMFATFASFY VAGRLWQESQ TRVHLINELD RVTGQGKSAI SVDDTLKIIA CREQKKTLAA LEMELSSARQ EGFVSKSPKL
101: ADGTETKKRP LVVIGIMTSL GNKKKRDAVR QAWMGTGASL KKLESEKGVI ARFVIGRSAN KGDSMDKSID TENSQTDDFI ILDDVVEAPE EASKKVKLFF
201: AYAADRWDAQ FYAKAIDNIY VNIDALGTTL AAHLENPRAY IGCMKSGEVF SEPNHKWYEP EWWKFGDKKA YFRHAYGEMY VITHALARFV SINRDILHSY
301: AHDDVSTGSW FVGLDVKHVD EGKFCCSAWS SEAICAGV
101: ADGTETKKRP LVVIGIMTSL GNKKKRDAVR QAWMGTGASL KKLESEKGVI ARFVIGRSAN KGDSMDKSID TENSQTDDFI ILDDVVEAPE EASKKVKLFF
201: AYAADRWDAQ FYAKAIDNIY VNIDALGTTL AAHLENPRAY IGCMKSGEVF SEPNHKWYEP EWWKFGDKKA YFRHAYGEMY VITHALARFV SINRDILHSY
301: AHDDVSTGSW FVGLDVKHVD EGKFCCSAWS SEAICAGV
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.