Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, golgi
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 2
- endoplasmic reticulum 2
- extracellular 1
- vacuole 1
- plasma membrane 1
- golgi 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX97371 | Canola | cytosol, endoplasmic reticulum | 93.12 | 93.58 |
| CDY14294 | Canola | cytosol, golgi | 92.14 | 92.36 |
| Bra010422.1-P | Field mustard | cytosol, golgi | 92.14 | 92.36 |
| CDX92791 | Canola | cytosol | 89.68 | 90.8 |
| CDY46675 | Canola | cytosol | 90.42 | 89.76 |
| Bra019081.1-P | Field mustard | cytosol | 83.78 | 88.34 |
| CDY68943 | Canola | golgi | 71.01 | 81.87 |
| CDY11037 | Canola | golgi, mitochondrion, plastid | 71.74 | 81.34 |
| VIT_19s0090g00560.t01 | Wine grape | cytosol, golgi | 75.43 | 75.8 |
| PGSC0003DMT400057471 | Potato | golgi | 73.96 | 73.77 |
| Solyc07g064670.2.1 | Tomato | nucleus | 73.71 | 73.53 |
| AT1G05170.2 | Thale cress | cytosol, golgi | 72.97 | 72.97 |
| GSMUA_Achr4P33450_001 | Banana | golgi | 71.5 | 72.21 |
| AT2G32430.1 | Thale cress | golgi | 72.24 | 71.88 |
| PGSC0003DMT400071658 | Potato | golgi | 68.3 | 71.28 |
| GSMUA_Achr4P23710_001 | Banana | golgi | 71.5 | 70.46 |
| GSMUA_Achr7P00260_001 | Banana | golgi | 70.27 | 70.44 |
| Os03t0577500-01 | Rice | golgi, peroxisome, plastid | 68.3 | 68.47 |
| EER91307 | Sorghum | golgi, peroxisome, plasma membrane | 68.8 | 68.46 |
| HORVU7Hr1G081720.2 | Barley | cytosol | 66.34 | 67.67 |
| TraesCS7B01G241500.2 | Wheat | cytosol, golgi, mitochondrion, nucleus | 66.09 | 67.25 |
| TraesCS7D01G339200.1 | Wheat | cytosol, golgi, mitochondrion, plastid | 66.09 | 67.25 |
| TraesCS7A01G330900.1 | Wheat | cytosol, golgi, mitochondrion, plastid | 65.6 | 66.75 |
| Zm00001d013804_P003 | Maize | golgi, plastid, vacuole | 67.81 | 66.35 |
| AT1G11730.1 | Thale cress | golgi, mitochondrion | 58.72 | 62.24 |
| AT1G77810.1 | Thale cress | golgi | 57.25 | 60.21 |
| AT1G32930.1 | Thale cress | golgi | 58.48 | 59.65 |
| AT1G33430.2 | Thale cress | golgi, vacuole | 55.77 | 56.33 |
| AT1G22015.1 | Thale cress | golgi | 52.58 | 53.77 |
| AT5G53340.1 | Thale cress | mitochondrion | 33.66 | 40.53 |
| AT2G25300.1 | Thale cress | plastid | 30.71 | 36.13 |
| AT4G32120.1 | Thale cress | golgi, nucleus, peroxisome | 30.47 | 35.94 |
| AT3G14960.1 | Thale cress | mitochondrion | 25.31 | 30.03 |
| AT2G26100.1 | Thale cress | plastid | 27.27 | 29.92 |
| AT1G53290.1 | Thale cress | mitochondrion | 25.06 | 29.57 |
Protein Annotations
| MapMan:21.4.1.1.5.3 | Gene3D:3.90.550.50 | EntrezGene:828801 | UniProt:A0A178V3W5 | UniProt:A0A1W6AK00 | ProteinID:AEE85272.1 |
| ProteinID:AEE85273.1 | ArrayExpress:AT4G26940 | EnsemblPlantsGene:AT4G26940 | RefSeq:AT4G26940 | TAIR:AT4G26940 | RefSeq:AT4G26940-TAIR-G |
| EnsemblPlants:AT4G26940.1 | TAIR:AT4G26940.1 | EMBL:AY085383 | Unigene:At.22123 | ProteinID:CAB36540.1 | ProteinID:CAB79549.1 |
| ncoils:Coil | InterPro:DUF4094 | GO:GO:0000139 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005794 | GO:GO:0005975 | GO:GO:0006464 |
| GO:GO:0006486 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008378 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016740 | GO:GO:0016757 | GO:GO:0019538 | InterPro:Glyco_trans_31 |
| EMBL:KY906031 | RefSeq:NP_567762.1 | RefSeq:NP_849454.1 | ProteinID:OAP01000.1 | PFAM:PF01762 | PFAM:PF13334 |
| PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 |
| PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 |
| PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 |
| PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 |
| PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 |
| PO:PO:0025281 | PANTHER:PTHR11214 | PANTHER:PTHR11214:SF5 | UniProt:Q8LEJ9 | UniParc:UPI00000A262E | SEG:seg |
Description
B3GALT4Hexosyltransferase [Source:UniProtKB/TrEMBL;Acc:A0A178V3W5]
Coordinates
chr4:-:13529260..13532755
Molecular Weight (calculated)
46022.7 Da
IEP (calculated)
7.288
GRAVY (calculated)
-0.437
Length
407 amino acids
Sequence
(BLAST)
(BLAST)
001: MSLKHHHRGL ELSASKSFVS KKWTLFLCIG FFCAGILFSD RMWPEPESNV VSRDTVASDE RLRLESEDCD SSKKGLKRES KDILGDVYKS PDAIQTLDKT
101: ISKLETELAD ARAAQESIMN GSPVSDDFKL PETVTKRKYL MVVGVNTAFS SRKRRDSVRA TWMPPGEERK KLEEEKGIVM RFVIGHSSTP GGILDRAIQA
201: EESKHGDFLR LDHVEGYLEL SAKTKTYFTT AFAMWDADFY VKVDDDVHVN IATLGAELAR YRMKPRVYIG CMKSGPVLAQ KGVRYHEPEY WKFGEEGNKY
301: FRHATGQLYA ISRELASYIS INQNVLHKYV NEDVSLGSWF LGLDVEHVDD RRLCCGTTDC EWKAQAGNIC VASFDWSCSG ICRSADRMKD VHRRCGEGEK
401: ALLAASF
101: ISKLETELAD ARAAQESIMN GSPVSDDFKL PETVTKRKYL MVVGVNTAFS SRKRRDSVRA TWMPPGEERK KLEEEKGIVM RFVIGHSSTP GGILDRAIQA
201: EESKHGDFLR LDHVEGYLEL SAKTKTYFTT AFAMWDADFY VKVDDDVHVN IATLGAELAR YRMKPRVYIG CMKSGPVLAQ KGVRYHEPEY WKFGEEGNKY
301: FRHATGQLYA ISRELASYIS INQNVLHKYV NEDVSLGSWF LGLDVEHVDD RRLCCGTTDC EWKAQAGNIC VASFDWSCSG ICRSADRMKD VHRRCGEGEK
401: ALLAASF
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.