Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- mitochondrion 1
- golgi 1
- cytosol 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY11534 | Canola | plastid | 91.04 | 91.3 |
| Bra007804.1-P | Field mustard | plastid | 91.04 | 91.04 |
| CDY58927 | Canola | cytosol | 90.17 | 90.7 |
| AT4G32120.1 | Thale cress | golgi, nucleus, peroxisome | 82.08 | 82.32 |
| VIT_04s0008g06480.t01 | Wine grape | golgi | 75.43 | 76.99 |
| KRH05191 | Soybean | mitochondrion, plastid | 69.08 | 74.92 |
| Solyc08g029170.2.1 | Tomato | plastid | 72.54 | 70.7 |
| KRH15831 | Soybean | mitochondrion | 76.3 | 66.17 |
| GSMUA_Achr8P24200_001 | Banana | cytosol | 67.34 | 64.72 |
| Os06t0177300-01 | Rice | golgi, mitochondrion, peroxisome, plastid | 65.61 | 64.12 |
| Os06t0176200-01 | Rice | golgi, mitochondrion, peroxisome, plastid | 65.61 | 64.12 |
| EER87954 | Sorghum | plastid | 65.32 | 64.02 |
| Zm00001d045146_P002 | Maize | plasma membrane | 64.45 | 63.17 |
| TraesCS7D01G141100.1 | Wheat | cytosol, golgi, mitochondrion, peroxisome, plastid | 62.14 | 60.73 |
| TraesCS7A01G139800.1 | Wheat | cytosol, golgi, mitochondrion, peroxisome, plastid | 61.85 | 60.11 |
| TraesCS7B01G041500.1 | Wheat | cytosol, golgi, mitochondrion, peroxisome, plastid | 61.56 | 59.5 |
| OQU75947 | Sorghum | mitochondrion | 61.56 | 58.2 |
| HORVU7Hr1G028670.1 | Barley | cytosol, golgi, plastid | 61.85 | 56.91 |
| AT5G53340.1 | Thale cress | mitochondrion | 40.46 | 41.42 |
| AT1G11730.1 | Thale cress | golgi, mitochondrion | 35.55 | 32.03 |
| AT1G77810.1 | Thale cress | golgi | 35.55 | 31.78 |
| AT1G32930.1 | Thale cress | golgi | 36.13 | 31.33 |
| AT1G05170.2 | Thale cress | cytosol, golgi | 36.13 | 30.71 |
| AT4G26940.1 | Thale cress | endoplasmic reticulum, golgi | 36.13 | 30.71 |
| AT1G33430.2 | Thale cress | golgi, vacuole | 35.26 | 30.27 |
| AT2G32430.1 | Thale cress | golgi | 35.55 | 30.07 |
| AT1G22015.1 | Thale cress | golgi | 32.66 | 28.39 |
| AT2G26100.1 | Thale cress | plastid | 25.43 | 23.72 |
| AT3G14960.1 | Thale cress | mitochondrion | 23.41 | 23.62 |
| AT1G53290.1 | Thale cress | mitochondrion | 23.41 | 23.48 |
Protein Annotations
| MapMan:18.1.2.1.2 | EntrezGene:817068 | ProteinID:AAD23661.1 | ProteinID:AEC07684.1 | ArrayExpress:AT2G25300 | EnsemblPlantsGene:AT2G25300 |
| RefSeq:AT2G25300 | TAIR:AT2G25300 | RefSeq:AT2G25300-TAIR-G | EnsemblPlants:AT2G25300.1 | TAIR:AT2G25300.1 | EMBL:BT015825 |
| EMBL:BT020527 | ncoils:Coil | InterPro:DUF4094 | GO:GO:0000139 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005794 | GO:GO:0005975 |
| GO:GO:0006464 | GO:GO:0006486 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008378 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0010405 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016740 | GO:GO:0016757 |
| GO:GO:0018258 | GO:GO:0019538 | GO:GO:1990714 | InterPro:Glyco_trans_31 | EMBL:KJ138899 | RefSeq:NP_180102.3 |
| PFAM:PF01762 | PFAM:PF13334 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 |
| PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 |
| PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 |
| PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 |
| PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 |
| PO:PO:0020137 | PO:PO:0025022 | PANTHER:PTHR11214 | PANTHER:PTHR11214:SF124 | UniProt:Q5XEZ1 | UniParc:UPI000044D370 |
| UniProt:W8Q717 | SEG:seg | : | : | : | : |
Description
HPGT3Hydroxyproline O-galactosyltransferase HPGT3 [Source:UniProtKB/Swiss-Prot;Acc:Q5XEZ1]
Coordinates
chr2:-:10771585..10774403
Molecular Weight (calculated)
39060.6 Da
IEP (calculated)
8.326
GRAVY (calculated)
-0.380
Length
346 amino acids
Sequence
(BLAST)
(BLAST)
001: MESLPTTVPS KSERRARSSK FSQSSSKPSV IMAFFSCVAW LYVAGRLWQD AENRVVLNNI LKKSYDQKPK VLTVDDKLMV LGCKDLERRI VETEMELTLA
101: KSQGYLKNLK SGSSSGKKLL AVIGVYSGFG SHLRRNTFRG SYMPQGDALR KLEERGIVIR FVIGRSPNRG DSLDRKIDEE NQARKDFLIL ENHEEAQEEL
201: AKKVKFFFSA AVQNWDAEFY IKVDDNIDLD LEGLIGLLES RRGQDAAYIG CMKSGEVVAE EGGKWYEPEW WKFGDEKSYF RHAAGSLLIL SKTLAQYVNI
301: NSGSLKTYAF DDTSIGSWMI GVQATYIDDN RLCCSSIRQD KVCSVA
101: KSQGYLKNLK SGSSSGKKLL AVIGVYSGFG SHLRRNTFRG SYMPQGDALR KLEERGIVIR FVIGRSPNRG DSLDRKIDEE NQARKDFLIL ENHEEAQEEL
201: AKKVKFFFSA AVQNWDAEFY IKVDDNIDLD LEGLIGLLES RRGQDAAYIG CMKSGEVVAE EGGKWYEPEW WKFGDEKSYF RHAAGSLLIL SKTLAQYVNI
301: NSGSLKTYAF DDTSIGSWMI GVQATYIDDN RLCCSSIRQD KVCSVA
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.