Factsheet for Solyc08g029170.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
golgi 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

plastid: 22908117

msms PMID: 22908117 doi

C Barsan, M Zouine, E Maza, W Bian, I Egea, M Rossignol, D Bouyssie, C Pichereaux, E Purgatto, M Bouzayen, A Latché, JC Pech

Université de Toulouse, Institut National Polytechnique-Ecole Nationale Supérieure Agronomique de Toulouse, Génomique et Biotechnologie des Fruits, Castanet-Tolosan F-31326, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY58927	Canola	cytosol	71.83	74.13
CDY11534	Canola	plastid	71.83	73.91
VIT_04s0008g06480.t01	Wine grape	golgi	70.42	73.75
Bra007804.1-P	Field mustard	plastid	71.83	73.7
KRH05191	Soybean	mitochondrion, plastid	65.35	72.73
AT2G25300.1	Thale cress	plastid	70.7	72.54
CDX68818	Canola	plastid	69.86	71.06
AT4G32120.1	Thale cress	golgi, nucleus, peroxisome	69.01	71.01
CDX75222	Canola	plastid	69.58	70.98
Bra011324.1-P	Field mustard	plastid	69.3	70.69
KRH15831	Soybean	mitochondrion	71.27	63.41
Zm00001d045146_P002	Maize	plasma membrane	62.82	63.17
EER87954	Sorghum	plastid	62.82	63.17
GSMUA_Achr8P24200_001	Banana	cytosol	63.66	62.78
Os06t0176200-01	Rice	golgi, mitochondrion, peroxisome, plastid	62.25	62.43
Os06t0177300-01	Rice	golgi, mitochondrion, peroxisome, plastid	62.25	62.43
TraesCS7D01G141100.1	Wheat	cytosol, golgi, mitochondrion, peroxisome, plastid	60.28	60.45
TraesCS7A01G139800.1	Wheat	cytosol, golgi, mitochondrion, peroxisome, plastid	60.0	59.83
TraesCS7B01G041500.1	Wheat	cytosol, golgi, mitochondrion, peroxisome, plastid	59.72	59.22
OQU75947	Sorghum	mitochondrion	58.31	56.56
HORVU7Hr1G028670.1	Barley	cytosol, golgi, plastid	59.72	56.38
Solyc08g081920.2.1	Tomato	nucleus	43.38	44.9
Solyc08g083340.1.1	Tomato	cytosol	13.24	37.9
Solyc12g096440.1.1	Tomato	cytosol	24.23	32.95
Solyc07g052320.2.1	Tomato	mitochondrion, plastid	36.9	32.11
Solyc11g013490.1.1	Tomato	golgi	34.37	30.81
Solyc12g005880.1.1	Tomato	plastid	33.8	30.38
Solyc11g042810.1.1	Tomato	golgi	33.52	30.2
Solyc07g064670.2.1	Tomato	nucleus	34.37	29.9
Solyc08g069060.2.1	Tomato	nucleus	32.96	29.55
Solyc07g062590.2.1	Tomato	plastid	26.48	26.78
Solyc10g007200.2.1	Tomato	golgi, mitochondrion	25.07	25.57

Protein Annotations

MapMan:18.1.2.1.2	ncoils:Coil	InterPro:DUF4094	GO:GO:0000139	GO:GO:0003674	GO:GO:0003824
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005794	GO:GO:0005975
GO:GO:0006464	GO:GO:0006486	GO:GO:0008150	GO:GO:0008152	GO:GO:0008378	GO:GO:0009058
GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016740	GO:GO:0016757	GO:GO:0019538
InterPro:Glyco_trans_31	UniProt:K4CJX9	PFAM:PF01762	PFAM:PF13334	PANTHER:PTHR11214	PANTHER:PTHR11214:SF124
EnsemblPlantsGene:Solyc08g029170.2	EnsemblPlants:Solyc08g029170.2.1	UniParc:UPI000276BE94	SEG:seg	:	:

Description

Hexosyltransferase [Source:UniProtKB/TrEMBL;Acc:K4CJX9]

Coordinates

chr8:+:38013845..38021903

Molecular Weight (calculated)

39872.4 Da

IEP (calculated)

8.730

GRAVY (calculated)

-0.348

Length

355 amino acids

Sequence
(BLAST)

001: MEGILPTTAF SVSSSSSKSD RRSKSKSTQT SSKPSLVLAL ISCFAWLYVA GRLWQDAENR VLLVALFKKN SQQRPKMLTV EDKLMVLGCK DLERRIVEVE
101: MELTVAKSQG YLQNQLKQSS SSSGKQFLAV IGIYTGFGGR LRRNVIRGSW FPNVDALSKL EARGVLVRFV VGRSPNRGDS LDRNINEENR ATKDFLILGS
201: HEEAHEELPK KAKYFFSSAI QTWDAEFYVK VDDNIDVDLD GLIELLQKRR GQNSSYIGCM KSGEVVSEEG KSWYEPEWWK FGDEKSYFRH AAGSVVVLSK
301: NLAQYININS ASLKSYAHED ISIGSWMMGL QTTYIDDSRL CCSTTTSQDK VCSLA

Best Arabidopsis Sequence Match ( AT4G32120.1 )
(BLAST)

001: MESLPTTVSG KSDRRGRFSK SQNTSKPSLI LAFFSCLAWL YVAGRLWQDA QYRAALNTVL KMNYDQRPKV LTVEDKLVVL GCKDLERRIV ETEMELAQAK
101: SQGYLKKQKS VSSSGKKMLA VIGVYTGFGS HLKRNKFRGS WMPRDDALKK LEERGVVIRF VIGRSANRGD SLDRKIDEEN RATKDFLILE NHEEAQEELP
201: KKVKFFYSAA VQNWDAEFYV KVDDNVDLDL EGMIALLESR RSQDGAYIGC MKSGDVITEE GSQWYEPEWW KFGDDKSYFR HATGSLVILS KNLAQYVNIN
301: SGLLKTYAFD DTTIGSWMIG VQATYIDDNR LCCSSTRQEK VCSMA

Arabidopsis Description

HPGT2Hydroxyproline O-galactosyltransferase HPGT2 [Source:UniProtKB/Swiss-Prot;Acc:Q94A05]
SUBAcon: [peroxisome,golgi,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.