CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 5
golgi 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER87954	Sorghum	plastid	87.43	90.65
Zm00001d045146_P002	Maize	plasma membrane	85.52	88.67
Os06t0177300-01	Rice	golgi, mitochondrion, peroxisome, plastid	79.78	82.49
Os06t0176200-01	Rice	golgi, mitochondrion, peroxisome, plastid	79.78	82.49
TraesCS7B01G041500.1	Wheat	cytosol, golgi, mitochondrion, peroxisome, plastid	73.22	74.86
TraesCS7D01G141100.1	Wheat	cytosol, golgi, mitochondrion, peroxisome, plastid	71.58	74.01
TraesCS7A01G139800.1	Wheat	cytosol, golgi, mitochondrion, peroxisome, plastid	71.58	73.6
GSMUA_Achr8P24200_001	Banana	cytosol	71.58	72.78
HORVU7Hr1G028670.1	Barley	cytosol, golgi, plastid	73.77	71.81
VIT_04s0008g06480.t01	Wine grape	golgi	63.11	68.14
KRH05191	Soybean	mitochondrion, plastid	55.46	63.64
AT4G32120.1	Thale cress	golgi, nucleus, peroxisome	59.56	63.19
Bra007804.1-P	Field mustard	plastid	59.56	63.01
Bra011324.1-P	Field mustard	plastid	59.84	62.93
CDX75222	Canola	plastid	59.56	62.64
CDX68818	Canola	plastid	59.56	62.46
CDY11534	Canola	plastid	58.74	62.32
CDY58927	Canola	cytosol	58.47	62.21
AT2G25300.1	Thale cress	plastid	58.2	61.56
Solyc08g029170.2.1	Tomato	plastid	56.56	58.31
KRH15831	Soybean	mitochondrion	61.2	56.14
EES13774	Sorghum	mitochondrion	43.44	45.95
KXG22053	Sorghum	golgi, plastid	34.7	31.28
EES14424	Sorghum	golgi, mitochondrion	32.51	30.91
EER88815	Sorghum	golgi	33.33	30.5
OQU85173	Sorghum	golgi, nucleus	33.06	30.4
EES04570	Sorghum	golgi	33.33	30.35
EER91307	Sorghum	golgi, peroxisome, plasma membrane	33.61	30.07
KXG35748	Sorghum	golgi	31.15	28.93
KXG19339	Sorghum	golgi, mitochondrion, plastid	24.32	24.45
OQU87975	Sorghum	cytosol	32.79	23.95
EES19194	Sorghum	golgi, peroxisome, plastid	23.77	23.2

Protein Annotations

MapMan:18.1.2.1.2	UniProt:A0A1W0VRP2	InterPro:DUF4094	GO:GO:0000139	GO:GO:0003674	GO:GO:0003824
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005794	GO:GO:0005975
GO:GO:0006464	GO:GO:0006486	GO:GO:0008150	GO:GO:0008152	GO:GO:0008378	GO:GO:0009058
GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016740	GO:GO:0016757	GO:GO:0019538
InterPro:Glyco_trans_31	EnsemblPlants:OQU75947	ProteinID:OQU75947	ProteinID:OQU75947.1	PFAM:PF01762	PFAM:PF13334
PANTHER:PTHR11214	PANTHER:PTHR11214:SF124	EnsemblPlantsGene:SORBI_3010G059600	TMHMM:TMhelix	UniParc:UPI0009DC87B9	SEG:seg

Description

hypothetical protein

Coordinates

chr10:+:4673050..4680158

Molecular Weight (calculated)

40937.9 Da

IEP (calculated)

9.264

GRAVY (calculated)

-0.310

Length

366 amino acids

Sequence
(BLAST)

001: MGTLASAMRR ENHRRSKAPS SALASGTVPL VMTFLSCLAW LYVAGRLWQD AQTRAILSAG LHEKSSGSVS KVLSVEDKLI RNLGCKAIGG KVVEAEMDLA
101: RAKTEGYLWE NRTAAVDSGK KQKLLAVIGV YTGFGSHRKR NVFRGSWMPR GDALKKLEEK GVVIRFVIGR SANRGDSLDR NIDDENQQTK DFLLLESHEE
201: VTEELPSKAK FFFSAAVDTW EAEFYVKVED NINLDLAGLI EMLEGRRGSQ GLYMGCMKSG VVISEKLRAR VNLTRVRLTL GYRQWYEPDW WKFGDSNTYF
301: RHASGSLFIL SKNLARYINI NSASLQSYAH DDISVGSWMM GLNATYVDDD RLCCSSSRQE KVCSNA

Best Arabidopsis Sequence Match ( AT4G32120.1 )
(BLAST)

001: MESLPTTVSG KSDRRGRFSK SQNTSKPSLI LAFFSCLAWL YVAGRLWQDA QYRAALNTVL KMNYDQRPKV LTVEDKLVVL GCKDLERRIV ETEMELAQAK
101: SQGYLKKQKS VSSSGKKMLA VIGVYTGFGS HLKRNKFRGS WMPRDDALKK LEERGVVIRF VIGRSANRGD SLDRKIDEEN RATKDFLILE NHEEAQEELP
201: KKVKFFYSAA VQNWDAEFYV KVDDNVDLDL EGMIALLESR RSQDGAYIGC MKSGDVITEE GSQWYEPEWW KFGDDKSYFR HATGSLVILS KNLAQYVNIN
301: SGLLKTYAFD DTTIGSWMIG VQATYIDDNR LCCSSTRQEK VCSMA

Arabidopsis Description

HPGT2Hydroxyproline O-galactosyltransferase HPGT2 [Source:UniProtKB/Swiss-Prot;Acc:Q94A05]
SUBAcon: [peroxisome,golgi,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.