CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
mitochondrion 1
golgi 1
nucleus 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX75222	Canola	plastid	99.14	99.43
Bra011324.1-P	Field mustard	plastid	98.57	98.85
AT4G32120.1	Thale cress	golgi, nucleus, peroxisome	91.98	93.04
CDY11534	Canola	plastid	82.81	83.77
CDY58927	Canola	cytosol	82.52	83.72
VIT_04s0008g06480.t01	Wine grape	golgi	74.5	76.7
KRH05191	Soybean	mitochondrion, plastid	68.19	74.61
Solyc08g029170.2.1	Tomato	plastid	71.06	69.86
KRH15831	Soybean	mitochondrion	74.5	65.16
EER87954	Sorghum	plastid	65.62	64.87
GSMUA_Achr8P24200_001	Banana	cytosol	66.76	64.72
Zm00001d045146_P002	Maize	plasma membrane	65.33	64.59
Os06t0177300-01	Rice	golgi, mitochondrion, peroxisome, plastid	65.33	64.41
Os06t0176200-01	Rice	golgi, mitochondrion, peroxisome, plastid	65.33	64.41
TraesCS7D01G141100.1	Wheat	cytosol, golgi, mitochondrion, peroxisome, plastid	63.04	62.15
TraesCS7A01G139800.1	Wheat	cytosol, golgi, mitochondrion, peroxisome, plastid	62.75	61.52
TraesCS7B01G041500.1	Wheat	cytosol, golgi, mitochondrion, peroxisome, plastid	62.46	60.89
OQU75947	Sorghum	mitochondrion	62.46	59.56
HORVU7Hr1G028670.1	Barley	cytosol, golgi, plastid	63.04	58.51
CDX96213	Canola	mitochondrion	40.69	42.39
CDY49171	Canola	mitochondrion	39.83	41.49
CDY35642	Canola	mitochondrion	39.83	41.12
CDY14386	Canola	mitochondrion	39.54	40.71
CDX93812	Canola	golgi	36.68	32.74
CDX97981	Canola	mitochondrion	35.53	31.71
CDY49800	Canola	mitochondrion	35.53	31.71
CDX97371	Canola	cytosol, endoplasmic reticulum	36.68	31.6
CDY12206	Canola	golgi	36.96	31.54
CDX96559	Canola	cytosol, nucleus, peroxisome	31.52	31.52
CDY48266	Canola	golgi	36.68	31.3
CDY04694	Canola	golgi	33.52	31.28
CDY14294	Canola	cytosol, golgi	36.39	31.28
CDX73278	Canola	vacuole	35.24	31.22
CDY46836	Canola	plastid	36.39	31.2
CDX92791	Canola	cytosol	35.82	31.09
CDY30641	Canola	golgi	33.24	31.02
CDY49507	Canola	plastid	36.39	30.98
CDY67379	Canola	vacuole	34.96	30.96
CDX88390	Canola	golgi	33.81	30.89
CDX87501	Canola	golgi	33.52	30.55
CDY46675	Canola	cytosol	35.82	30.49
CDY68943	Canola	golgi	30.66	30.31
CDY11037	Canola	golgi, mitochondrion, plastid	30.95	30.08
CDY38836	Canola	golgi	33.24	29.74
CDY54843	Canola	golgi	36.68	29.22
CDY00412	Canola	golgi	33.24	29.22
CDY01303	Canola	golgi	30.09	27.2
CDX97620	Canola	mitochondrion	23.5	23.98
CDY35316	Canola	plastid	24.93	23.97
CDX77030	Canola	plastid	24.64	23.69
CDY25866	Canola	mitochondrion	23.5	23.56
CDY55849	Canola	mitochondrion	23.5	23.56
CDY55848	Canola	mitochondrion	23.5	23.56
CDX75799	Canola	mitochondrion	22.92	23.39
CDX98518	Canola	mitochondrion	23.5	23.36
CDX82456	Canola	mitochondrion	22.35	22.81
CDY42221	Canola	cytosol	8.31	22.31

Protein Annotations

MapMan:18.1.2.1.2	GO:A0A078C116	EnsemblPlants:CDX68818	ProteinID:CDX68818	ProteinID:CDX68818.1	ncoils:Coil
InterPro:DUF4094	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005975	GO:GO:0006464
GO:GO:0006486	GO:GO:0008150	GO:GO:0008152	GO:GO:0008378	GO:GO:0009058	GO:GO:0009987
GO:GO:0016020	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00130538001	InterPro:Glyco_trans_31	PFAM:PF01762
PFAM:PF13334	PANTHER:PTHR11214	PANTHER:PTHR11214:SF124	UniPathway:UPA00378	UniParc:UPI0004EF3CB7	SEG:seg

Description

BnaC01g06350D

Coordinates

chrLK031789:-:1422906..1425679

Molecular Weight (calculated)

39523.2 Da

IEP (calculated)

8.905

GRAVY (calculated)

-0.464

Length

349 amino acids

Sequence
(BLAST)

001: MESLPTTVSS KSDRRGRSSK SQNTSKPSLI MAFFSCLAWL YVAGRLWQDA QHRVALNTVL KKNLELRPKA LTVDDKLMVL GCKDLERRIV ETEMELAQAK
101: SQGYLKNQKS LSSSSSGNKK KMLAVIGVYT GFGSHLKRNK FRGSWMPRDD ALKKLEERGV IIRFVIGRSA NRGDSLDRKI DQENLATKDF LILENHEEAQ
201: EELPKKVKFF YSAAVQNWDA EFYVKVDDNV DLDLEGLIGL LESRRGQDGA YIGCMKSGDV VTQEGSQWYE PEWWKFGDDK SYFRHATGSL VILSKNLAQY
301: ININSGLLKT YAFDDTTIGS WMIGVQATYI DDNRLCCSST RQEKVCSMA

Best Arabidopsis Sequence Match ( AT4G32120.1 )
(BLAST)

001: MESLPTTVSG KSDRRGRFSK SQNTSKPSLI LAFFSCLAWL YVAGRLWQDA QYRAALNTVL KMNYDQRPKV LTVEDKLVVL GCKDLERRIV ETEMELAQAK
101: SQGYLKKQKS VSSSGKKMLA VIGVYTGFGS HLKRNKFRGS WMPRDDALKK LEERGVVIRF VIGRSANRGD SLDRKIDEEN RATKDFLILE NHEEAQEELP
201: KKVKFFYSAA VQNWDAEFYV KVDDNVDLDL EGMIALLESR RSQDGAYIGC MKSGDVITEE GSQWYEPEWW KFGDDKSYFR HATGSLVILS KNLAQYVNIN
301: SGLLKTYAFD DTTIGSWMIG VQATYIDDNR LCCSSTRQEK VCSMA

Arabidopsis Description

HPGT2Hydroxyproline O-galactosyltransferase HPGT2 [Source:UniProtKB/Swiss-Prot;Acc:Q94A05]
SUBAcon: [peroxisome,golgi,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.