CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 5
golgi 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra027291.1-P	Field mustard	mitochondrion	97.95	97.67
CDX98518	Canola	mitochondrion	98.25	95.73
CDX82456	Canola	mitochondrion	90.64	90.64
CDX75799	Canola	mitochondrion	89.47	89.47
AT3G14960.1	Thale cress	mitochondrion	86.84	86.59
CDY25866	Canola	mitochondrion	83.33	81.9
CDY55848	Canola	mitochondrion	83.33	81.9
CDY55849	Canola	mitochondrion	83.04	81.61
PGSC0003DMT400054913	Potato	golgi, mitochondrion	73.39	72.13
Solyc10g007200.2.1	Tomato	golgi, mitochondrion	72.81	71.55
Solyc07g062590.2.1	Tomato	plastid	72.51	70.66
PGSC0003DMT400032365	Potato	plastid	71.93	70.29
VIT_19s0014g01490.t01	Wine grape	golgi, mitochondrion, plastid	70.76	69.54
KRH55102	Soybean	plastid	68.71	69.53
KRH26222	Soybean	plastid	68.13	68.93
KRH21986	Soybean	mitochondrion	67.25	68.45
GSMUA_Achr7P14080_001	Banana	golgi, plastid	66.67	66.28
CDY42221	Canola	cytosol	25.15	66.15
TraesCS7A01G115200.1	Wheat	plastid	67.25	63.36
TraesCS7D01G111900.1	Wheat	plastid	66.96	63.09
Zm00001d036240_P003	Maize	plastid	66.67	62.81
KXG19339	Sorghum	golgi, mitochondrion, plastid	66.37	62.36
Os06t0156900-01	Rice	golgi, plastid	66.67	61.96
TraesCS7B01G013300.1	Wheat	plastid	66.37	61.35
Zm00001d045297_P001	Maize	plastid	44.44	59.38
GSMUA_Achr10P...	Banana	mitochondrion	52.92	58.77
CDX77030	Canola	plastid	58.48	55.1
CDY35316	Canola	plastid	58.19	54.82
HORVU7Hr1G024690.2	Barley	mitochondrion, plastid	66.67	52.9
CDX96559	Canola	cytosol, nucleus, peroxisome	31.29	30.66
CDY04694	Canola	golgi	32.46	29.68
CDY38836	Canola	golgi	33.63	29.49
CDY30641	Canola	golgi	32.16	29.41
CDX88390	Canola	golgi	31.29	28.01
CDX87501	Canola	golgi	31.29	27.94
CDY00412	Canola	golgi	32.16	27.71
CDX97981	Canola	mitochondrion	30.99	27.11
CDY49800	Canola	mitochondrion	30.99	27.11
CDY46836	Canola	plastid	32.16	27.03
CDY49507	Canola	plastid	31.87	26.59
CDY01303	Canola	golgi	29.53	26.17
CDX93812	Canola	golgi	29.82	26.09
CDX97371	Canola	cytosol, endoplasmic reticulum	30.41	25.68
CDX92791	Canola	cytosol	30.12	25.62
CDY14294	Canola	cytosol, golgi	30.41	25.62
CDY46675	Canola	cytosol	30.7	25.61
CDY67379	Canola	vacuole	29.24	25.38
CDX73278	Canola	vacuole	29.24	25.38
CDY12206	Canola	golgi	29.82	24.94
CDY48266	Canola	golgi	29.53	24.69
CDX96213	Canola	mitochondrion	23.68	24.18
CDY11534	Canola	plastid	24.27	24.06
CDY49171	Canola	mitochondrion	23.39	23.88
CDX75222	Canola	plastid	23.98	23.56
CDY58927	Canola	cytosol	23.68	23.55
CDX68818	Canola	plastid	23.98	23.5
CDY35642	Canola	mitochondrion	23.1	23.37
CDY14386	Canola	mitochondrion	23.1	23.3
CDY54843	Canola	golgi	29.82	23.29
CDY11037	Canola	golgi, mitochondrion, plastid	23.1	22.01
CDY68943	Canola	golgi	22.51	21.81

Protein Annotations

MapMan:21.4.1.1.5.3	GO:A0A078E699	EnsemblPlants:CDX97620	ProteinID:CDX97620	ProteinID:CDX97620.1	GO:GO:0003674
GO:GO:0003824	GO:GO:0005575	GO:GO:0005975	GO:GO:0006464	GO:GO:0006486	GO:GO:0008150
GO:GO:0008152	GO:GO:0008378	GO:GO:0009058	GO:GO:0009987	GO:GO:0016020	GO:GO:0016740
GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00104841001	InterPro:Glyco_trans_31	InterPro:IPR029044	InterPro:Nucleotide-diphossugar_trans	PFAM:PF01762
PANTHER:PTHR11214	PANTHER:PTHR11214:SF108	SUPFAM:SSF53448	TMHMM:TMhelix	UniPathway:UPA00378	UniParc:UPI0004EEE544
SEG:seg	:	:	:	:	:

Description

BnaA05g24590D

Coordinates

chrLK031900:-:648056..650267

Molecular Weight (calculated)

38511.5 Da

IEP (calculated)

8.943

GRAVY (calculated)

-0.217

Length

342 amino acids

Sequence
(BLAST)

001: MPSSPRLKLF HARTSPSSRR STSLIVLTSL AIGLFGFIFG LSAIVFPSRT CLTNSPPKTV KVVWDVAGNS NGNGLSGGVK RHKVMGFVGI QTGFGSAGRR
101: RALRSTWMPS DPEGLRRLEE STGLAIRFII GKTKDEKKMA ELRREIAEYD DFILLDIEEE YSKLPYKTLA FFKAAYALYD SEFYVKADDD IYLRPDRLSL
201: LLAKERSHSQ TYLGCLKKGP VFTDPKLKWY EPLADLLGKE YFLHAYGPIY ALSADVVTSL LFSNFSFRMF SNEDVTIGAW MLAMNVNHEN HKTLCERECS
301: PYSIAVWDIP KCSGLCNPEK RMLELHKIKS CSKSPTLPSE DE

Best Arabidopsis Sequence Match ( AT2G26100.1 )
(BLAST)

001: MPLFSHRFTT ASSSSPASPS YYNKPSSKTH KPNSSSSSYT SSRIHVAIIF FSLVSVFIGV AGTIFALSST GPASVYRCGG SKDTSRVVSA SRKLGGDGGN
101: NGVVVERRKL LGFVGIQTGF DSGDRRTALR STWFPSDPDS LLRLEQATGL AFRFVIGKSK DAKKMAELEK EIKEYRDFVL LDTEEEYIRL PYKTLAFFKA
201: AFKLFEADYY VKADDDIYLR PDRLATLLAN ERLHSQTYIG CMKKGPVITD PKLKWYEKQG NLIGNEYFLH AYGPIYVLSA EIVASLAAAR NGSLRMFNNE
301: DVTIGSWMLA MDVHHEDNRA LCDPHCSPKS IAVWDIPKCS GLCDPESRLK ELHKTDMCSK SPTLPPDDID Q

Arabidopsis Description

B3GALT12Hexosyltransferase [Source:UniProtKB/TrEMBL;Acc:A0A178VU65]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.