Factsheet for GSMUA_Achr10P21710_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 4
golgi 2
plasma membrane 3
extracellular 1
endoplasmic reticulum 1
vacuole 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	golgi
Plant-mPloc:	plasma membrane
Predotar:	mitochondrion
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr7P14080_001	Banana	golgi, plastid	72.08	64.53
Zm00001d045297_P001	Maize	plastid	50.32	60.55
VIT_19s0014g01490.t01	Wine grape	golgi, mitochondrion, plastid	63.96	56.61
Solyc10g007200.2.1	Tomato	golgi, mitochondrion	61.69	54.6
KRH21986	Soybean	mitochondrion	59.42	54.46
PGSC0003DMT400054913	Potato	golgi, mitochondrion	61.36	54.31
Bra027291.1-P	Field mustard	mitochondrion	60.39	54.23
TraesCS7D01G111900.1	Wheat	plastid	63.64	53.99
TraesCS7A01G115200.1	Wheat	plastid	63.31	53.72
AT3G14960.1	Thale cress	mitochondrion	59.74	53.64
KRH55102	Soybean	plastid	58.77	53.55
Bra001576.1-P	Field mustard	mitochondrion	59.42	53.51
CDX82456	Canola	mitochondrion	59.42	53.51
KXG19339	Sorghum	golgi, mitochondrion, plastid	62.99	53.3
CDX98518	Canola	mitochondrion	60.71	53.28
Zm00001d036240_P003	Maize	plastid	62.66	53.17
AT1G53290.1	Thale cress	mitochondrion	59.42	53.04
TraesCS7B01G013300.1	Wheat	plastid	63.64	52.97
CDX97620	Canola	mitochondrion	58.77	52.92
Os06t0156900-01	Rice	golgi, plastid	62.99	52.72
CDX75799	Canola	mitochondrion	58.44	52.63
PGSC0003DMT400032365	Potato	plastid	59.74	52.57
CDY55848	Canola	mitochondrion	59.09	52.3
Solyc07g062590.2.1	Tomato	plastid	59.42	52.14
KRH26222	Soybean	plastid	57.14	52.07
Bra038114.1-P	Field mustard	mitochondrion	58.77	52.01
CDY25866	Canola	mitochondrion	58.77	52.01
CDY55849	Canola	mitochondrion	58.77	52.01
HORVU7Hr1G024690.2	Barley	mitochondrion, plastid	63.96	45.71
GSMUA_Achr6P05430_001	Banana	endoplasmic reticulum, nucleus, plastid	46.75	38.3
GSMUA_Achr4P33450_001	Banana	golgi	30.52	23.33
GSMUA_Achr8P08420_001	Banana	cytosol	29.55	23.04
GSMUA_Achr5P23050_001	Banana	cytosol, golgi, mitochondrion, plastid	29.55	22.75
GSMUA_Achr11P...	Banana	golgi	30.19	22.46
GSMUA_Achr7P00260_001	Banana	golgi	29.55	22.41
GSMUA_Achr4P23710_001	Banana	golgi	29.22	21.79
GSMUA_Achr4P00940_001	Banana	mitochondrion	23.7	21.66
GSMUA_Achr8P23200_001	Banana	golgi	29.55	21.31
GSMUA_Achr8P24200_001	Banana	cytosol	24.68	21.11
GSMUA_Achr9P30290_001	Banana	cytosol	28.57	20.85
GSMUA_Achr5P00690_001	Banana	golgi	26.62	20.45

Protein Annotations

MapMan:21.4.1.1.5.3	GO:GO:0000139	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005794	GO:GO:0005975	GO:GO:0006464	GO:GO:0006486
GO:GO:0008150	GO:GO:0008152	GO:GO:0008378	GO:GO:0009058	GO:GO:0009987	GO:GO:0016020
GO:GO:0016021	GO:GO:0016740	GO:GO:0016757	GO:GO:0019538	EnsemblPlantsGene:GSMUA_Achr10G21710_001	EnsemblPlants:GSMUA_Achr10P21710_001
EnsemblPlants:GSMUA_Achr10T21710_001	InterPro:Glyco_trans_31	UniProt:M0RK96	PFAM:PF01762	PANTHER:PTHR11214	PANTHER:PTHR11214:SF108
TMHMM:TMhelix	UniParc:UPI0002956830	SEG:seg	:	:	:

Description

Probable beta-1,3-galactosyltransferase 13 [Source:GMGC_GENE;Acc:GSMUA_Achr10G21710_001]

Coordinates

chr10:-:27192848..27195316

Molecular Weight (calculated)

34725.7 Da

IEP (calculated)

10.155

GRAVY (calculated)

0.141

Length

308 amino acids

Sequence
(BLAST)

001: MPKSPRVFHT SPLSRFRHLA STSAFSLVCL VFGITGILFG VISVSLPVRR CLDMEPRSVS VVWDHGGGTG GGGTAERRKV MAFVGIQTGF GSVGRRRSIR
101: RTWLPSHRQG LLRLEEATGL AFRFVVGKTK DKSKMAALQL EVKEYDDFML LDIEEEYSNL PHKTLAFFKA AFALYDSDFY VKADDDIYLR PDRLSLLLAK
201: ERQNPQTYLG CMKKGPVFTD PKLKWYEPLA YLLGEEYFLH AYGPIYALSA DVVSSLVALR NNRQVKSFWM LTVILLLLGV LSKLLRVMSL FHLFLLFAVV
301: VAIRNSST

Best Arabidopsis Sequence Match ( AT3G14960.1 )
(BLAST)

001: MSSSPKLFHA RPSFFTRRST PLIVFTSLAI GLTGFLFGLS TILFPGLRLS GRSCLTNLPP KTVKIVWDVA GNSIVNGEVK RHKVMGFVGI QTGFRSAGRR
101: RALRNTWMPS DPEGLRRLEE STGLAIRFII GKTKDEAKMV ELRSEVAMYD DFILLDIEEE YSKLPYKTLA FFKAAYALYD SEFYVKADDD IYLRPDRLSL
201: LLAKERGHSQ TYLGCMKKGP VFTDPKLKWY EPLADLLGKE YFLHAYGPIY ALSADVVTSL VALKNNSFRM FSNEDVTIGA WMLAMNVNHE NLHTLCEPEC
301: SPYSIAVWDI PKCSGLCNPE KRMLELHMLE SCSKSPTLPS DDE

Arabidopsis Description

B3GALT13Hexosyltransferase (Fragment) [Source:UniProtKB/TrEMBL;Acc:W8Q363]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.