Factsheet for GSMUA_Achr5P00690_001

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

plastid 2
mitochondrion 3
golgi 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
cytosol 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	golgi
Plant-mPloc:	plastid
Predotar:	secretory
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr9P30290_001	Banana	cytosol	86.03	81.75
Os02t0164300-02	Rice	cytosol	36.41	80.22
GSMUA_Achr4P33450_001	Banana	golgi	71.82	71.46
GSMUA_Achr7P00260_001	Banana	golgi	71.32	70.44
VIT_10s0116g01710.t01	Wine grape	cytosol	71.07	69.85
GSMUA_Achr4P23710_001	Banana	golgi	71.57	69.49
Zm00001d053825_P002	Maize	golgi	69.08	68.91
EES04570	Sorghum	golgi	68.83	68.66
KRH51094	Soybean	cytosol	58.1	67.54
HORVU7Hr1G105510.13	Barley	golgi	66.33	67.34
TraesCS7D01G446600.1	Wheat	golgi	65.84	66.5
KRH02065	Soybean	golgi, mitochondrion	61.35	65.78
TraesCS7A01G458600.1	Wheat	golgi	66.08	65.76
EER88815	Sorghum	golgi	65.59	65.75
HORVU6Hr1G026680.2	Barley	golgi	65.09	65.25
TraesCS6D01G127200.1	Wheat	golgi	64.84	65.0
TraesCS6B01G166400.1	Wheat	golgi	64.84	65.0
TraesCS6A01G138100.1	Wheat	golgi	64.84	65.0
Os06t0679500-01	Rice	golgi	63.59	64.56
TraesCS7B01G358000.2	Wheat	golgi	65.84	64.55
AT1G11730.1	Thale cress	golgi, mitochondrion	59.35	61.98
Zm00001d014361_P001	Maize	golgi	64.34	61.87
GSMUA_Achr5P23050_001	Banana	cytosol, golgi, mitochondrion, plastid	60.6	60.75
Bra019835.1-P	Field mustard	mitochondrion	58.35	59.85
CDY49800	Canola	mitochondrion	58.35	59.85
CDX97981	Canola	mitochondrion	58.1	59.59
GSMUA_Achr8P23200_001	Banana	golgi	60.6	56.91
GSMUA_Achr8P08420_001	Banana	cytosol	54.11	54.94
GSMUA_Achr11P...	Banana	golgi	56.61	54.83
GSMUA_Achr4P00940_001	Banana	mitochondrion	35.66	42.43
GSMUA_Achr8P24200_001	Banana	cytosol	31.17	34.72
GSMUA_Achr7P14080_001	Banana	golgi, plastid	25.44	29.65
GSMUA_Achr10P...	Banana	mitochondrion	20.45	26.62
GSMUA_Achr6P05430_001	Banana	endoplasmic reticulum, nucleus, plastid	24.69	26.33

Protein Annotations

MapMan:21.4.1.1.5.3	Gene3D:3.90.550.50	ncoils:Coil	InterPro:DUF4094	GO:GO:0000139	GO:GO:0003674
GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005794
GO:GO:0005975	GO:GO:0006464	GO:GO:0006486	GO:GO:0008150	GO:GO:0008152	GO:GO:0008378
GO:GO:0009058	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016740	GO:GO:0016757
GO:GO:0019538	EnsemblPlantsGene:GSMUA_Achr5G00690_001	EnsemblPlants:GSMUA_Achr5P00690_001	EnsemblPlants:GSMUA_Achr5T00690_001	InterPro:Glyco_trans_31	UniProt:M0SUJ8
PFAM:PF01762	PFAM:PF13334	PANTHER:PTHR11214	PANTHER:PTHR11214:SF5	TMHMM:TMhelix	UniParc:UPI0002968856
SEG:seg	:	:	:	:	:

Description

Probable beta-1,3-galactosyltransferase 2 [Source:GMGC_GENE;Acc:GSMUA_Achr5G00690_001]

Coordinates

chr5:+:367405..373007

Molecular Weight (calculated)

45787.9 Da

IEP (calculated)

9.278

GRAVY (calculated)

-0.481

Length

401 amino acids

Sequence
(BLAST)

001: MSWKSRGGEK TVSRRWTLLL CVGSFFTGLV FTNRMWLVPD AKDIIRTSKS KEHRKEVITE RYYPKLMDQK EEARKILGEN STTDEDLQLL NKTISNLEME
101: LAAARMAQES LLKRSPLAEE PKAINTSRRH KYFMVIGINT AFNSRKRRDS VRATWMPQGE KRKKLEEEKG IVIRFVIGHG ATSGGILDRT IEAEDRKHGD
201: FLRLNHVEGY LELSAKTRTY FATAVSLWDA NFYIKVDDDV HVNIATLGTT LARYRLKPRV YIGCMKCGPV LARKGVKYHE PEHWKFGGVG NKYFRHATGQ
301: LYAISNELAT YISINQHILH KYANEDVSLG SWFIGLDVEH IDDRKLCCGT PPDCEGKARA GNTCVASFDW NCSGICDSVD RIKEVHRRCG ENESAIWNAV
401: F

Best Arabidopsis Sequence Match ( AT1G05170.2 )
(BLAST)

001: MSAKIKGEYS SRSFVSRKWT ILLCLGSFCV GMFFTNRMWN IPESKGMSHP SVTEAERLKL VSEGCNPKAL YQKEVKRDPQ ALFGEVANTH IALQTLDKTI
101: SSLEMELAAA RSVQESLQNG APLSDDMGKK QPQEQRRFLM VVGINTAFSS RKRRDSIRAT WMPQGEKRKR LEEEKGIIIR FVIGHSATTG GILDRAIEAE
201: DRKHGDFLRL DHVEGYLELS GKTKTYFSTA FSMWDADFYV KVDDDVHVNI ATLGETLVRH RKKPRVYIGC MKSGPVLSQK GVRYHEPEYW KFGENGNKYF
301: RHATGQLYAI SRDLASYISI NQHVLHKYAN EDVSLGAWFI GIDVKHIDDR RLCCGTPPDC EWKAQAGNIC VASFDWSCSG ICRSADRIKE VHRRCGEGEK
401: ALWSATF

Arabidopsis Description

B3GALT2Hexosyltransferase (Fragment) [Source:UniProtKB/TrEMBL;Acc:W8Q3U9]
SUBAcon: [golgi,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.