Factsheet for Zm00001d053825_P002

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

mitochondrion 3
golgi 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	mitochondrion, secretory
iPSORT:	mitochondrion
MultiLoc:	golgi
Predotar:	secretory
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES04570	Sorghum	golgi	97.51	97.51
Os02t0164300-02	Rice	cytosol	43.53	96.15
TraesCS6A01G138100.1	Wheat	golgi	88.06	88.5
TraesCS6B01G166400.1	Wheat	golgi	88.06	88.5
TraesCS6D01G127200.1	Wheat	golgi	88.06	88.5
HORVU6Hr1G026680.2	Barley	golgi	87.81	88.25
Zm00001d014361_P001	Maize	golgi	79.35	76.5
GSMUA_Achr5P00690_001	Banana	golgi	68.91	69.08
VIT_10s0116g01710.t01	Wine grape	cytosol	68.16	67.16
GSMUA_Achr9P30290_001	Banana	cytosol	68.66	65.4
Zm00001d013804_P003	Maize	golgi, plastid, vacuole	66.92	64.66
KRH02065	Soybean	golgi, mitochondrion	59.95	64.44
KRH51094	Soybean	cytosol	54.98	64.06
AT1G11730.1	Thale cress	golgi, mitochondrion	58.46	61.2
Bra019835.1-P	Field mustard	mitochondrion	59.2	60.87
CDY49800	Canola	mitochondrion	59.2	60.87
CDX97981	Canola	mitochondrion	58.71	60.36
Zm00001d016891_P001	Maize	plasma membrane	59.2	59.8
Zm00001d020692_P002	Maize	golgi, mitochondrion	58.46	56.76
Zm00001d000099_P003	Maize	golgi	57.21	54.5
Zm00001d012234_P002	Maize	mitochondrion	51.24	48.7
Zm00001d035090_P002	Maize	mitochondrion	46.27	41.61
Zm00001d045146_P002	Maize	plasma membrane	31.59	35.98
Zm00001d050251_P002	Maize	mitochondrion	33.33	33.0
Zm00001d032267_P003	Maize	mitochondrion	31.84	31.53
Zm00001d036240_P003	Maize	plastid	27.36	30.3
Zm00001d045297_P001	Maize	plastid	18.41	28.91
Zm00001d009997_P001	Maize	plasma membrane	23.38	25.07

Protein Annotations

EntrezGene:100282742	MapMan:21.4.1.1.5.3	Gene3D:3.90.550.50	ProteinID:AQK60469.1	ncoils:Coil	InterPro:DUF4094
GO:GO:0000139	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005794	GO:GO:0005975	GO:GO:0006464	GO:GO:0006486	GO:GO:0008150
GO:GO:0008152	GO:GO:0008378	GO:GO:0009058	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021
GO:GO:0016740	GO:GO:0016757	GO:GO:0019538	InterPro:Glyco_trans_31	UniProt:K7U7W4	PFAM:PF01762
PFAM:PF13334	PANTHER:PTHR11214	PANTHER:PTHR11214:SF120	UniParc:UPI00022127FF	EnsemblPlantsGene:Zm00001d053825	EnsemblPlants:Zm00001d053825_P002
EnsemblPlants:Zm00001d053825_T002	SEG:seg	:	:	:	:

Description

Beta-1%2C3-galactosyltransferase sqv-2

Coordinates

chr4:-:241807558..241811083

Molecular Weight (calculated)

45148.6 Da

IEP (calculated)

7.516

GRAVY (calculated)

-0.381

Length

402 amino acids

Sequence
(BLAST)

001: MSWRRGGSGG DGGVSRRWAV LLCVGSFCLG LLFTNRMWTL PEASEIARPN ANVEEGTVPI AAECGSKKVQ EKQDYRDILQ VQDSHHDVQT LDKTIASLET
101: ELSAARSLQE SLLNGSPVAE EYKVSESIGR RKYLMVIGIN TAFSSRKRRD SIRYTWMPQG EKRKKLEEEK GIIIRFVIGH SAISGGIVDR AIEAEDRKHG
201: DFMRIDHVEG YLALSGKTKT YFATAVSLWD ADFYVKVDDD VHVNIATLGQ ILSKHALKPR VYIGCMKSGP VLSEKGVRYY EPEHWKFGES GNKYFRHATG
301: QLYAVSKDLA TYISINKHIL HKYINEDVSL GSWFIGLDVE HIDDRRLCCG TPPDCEWKAQ AGNVCAASFD WRCSGICNSE GRIWEVHNKC AEGEKALWNA
401: TF

Best Arabidopsis Sequence Match ( AT1G05170.2 )
(BLAST)

001: MSAKIKGEYS SRSFVSRKWT ILLCLGSFCV GMFFTNRMWN IPESKGMSHP SVTEAERLKL VSEGCNPKAL YQKEVKRDPQ ALFGEVANTH IALQTLDKTI
101: SSLEMELAAA RSVQESLQNG APLSDDMGKK QPQEQRRFLM VVGINTAFSS RKRRDSIRAT WMPQGEKRKR LEEEKGIIIR FVIGHSATTG GILDRAIEAE
201: DRKHGDFLRL DHVEGYLELS GKTKTYFSTA FSMWDADFYV KVDDDVHVNI ATLGETLVRH RKKPRVYIGC MKSGPVLSQK GVRYHEPEYW KFGENGNKYF
301: RHATGQLYAI SRDLASYISI NQHVLHKYAN EDVSLGAWFI GIDVKHIDDR RLCCGTPPDC EWKAQAGNIC VASFDWSCSG ICRSADRIKE VHRRCGEGEK
401: ALWSATF

Arabidopsis Description

B3GALT2Hexosyltransferase (Fragment) [Source:UniProtKB/TrEMBL;Acc:W8Q3U9]
SUBAcon: [golgi,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.