Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- golgi 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- plastid 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
plasma membrane:
27341663
|
msms PMID:
27341663
doi
Bond Life Sciences Center, University of Missouri, Columbia, MO, 65211, USA., Division of Biochemistry, University of Missouri, Columbia, MO, 65211, USA., Division of Plant Sciences, University of Missouri, Columbia, MO, 65211, USA., Interdisciplinary Plant Group, University of Missouri, Columbia, MO, 65211, USA.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES19194 | Sorghum | golgi, peroxisome, plastid | 95.2 | 95.2 |
| TraesCS1A01G125600.1 | Wheat | cytosol, golgi, peroxisome | 79.2 | 78.99 |
| TraesCS1D01G127900.1 | Wheat | cytosol, golgi, peroxisome | 78.93 | 78.72 |
| TraesCS1B01G144600.1 | Wheat | cytosol, golgi, peroxisome | 78.13 | 77.93 |
| Os05t0199500-01 | Rice | mitochondrion | 75.2 | 72.31 |
| HORVU1Hr1G029110.2 | Barley | cytosol, plasma membrane, plastid | 78.67 | 65.7 |
| CDY42221 | Canola | cytosol | 21.33 | 61.54 |
| VIT_13s0158g00110.t01 | Wine grape | cytosol | 12.8 | 52.17 |
| VIT_04s0008g01270.t01 | Wine grape | plastid | 50.13 | 52.08 |
| GSMUA_Achr6P05430_001 | Banana | endoplasmic reticulum, nucleus, plastid | 49.87 | 49.73 |
| Bra034289.1-P | Field mustard | plastid | 46.67 | 48.21 |
| CDY35316 | Canola | plastid | 46.67 | 48.21 |
| CDX77030 | Canola | plastid | 46.4 | 47.93 |
| AT2G26100.1 | Thale cress | plastid | 46.93 | 47.44 |
| Zm00001d036240_P003 | Maize | plastid | 42.67 | 44.08 |
| Zm00001d045297_P001 | Maize | plastid | 28.27 | 41.41 |
| Zm00001d016891_P001 | Maize | plasma membrane | 25.87 | 24.37 |
| Zm00001d045146_P002 | Maize | plasma membrane | 22.93 | 24.36 |
| Zm00001d053825_P002 | Maize | golgi | 25.07 | 23.38 |
| Zm00001d013804_P003 | Maize | golgi, plastid, vacuole | 25.87 | 23.32 |
| Zm00001d014361_P001 | Maize | golgi | 25.6 | 23.02 |
| Zm00001d020692_P002 | Maize | golgi, mitochondrion | 25.33 | 22.95 |
| Zm00001d012234_P002 | Maize | mitochondrion | 25.6 | 22.7 |
| Zm00001d050251_P002 | Maize | mitochondrion | 23.47 | 21.67 |
| Zm00001d000099_P003 | Maize | golgi | 24.27 | 21.56 |
| Zm00001d032267_P003 | Maize | mitochondrion | 22.4 | 20.69 |
| Zm00001d035090_P002 | Maize | mitochondrion | 20.53 | 17.23 |
Protein Annotations
| EntrezGene:100192460 | MapMan:21.4.1.1.5.3 | ProteinID:AQK93214.1 | UniProt:B4FBF1 | EMBL:BT034439 | GO:GO:0000139 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005794 | GO:GO:0005975 | GO:GO:0006464 | GO:GO:0006486 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0008378 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016740 |
| GO:GO:0016757 | GO:GO:0019538 | InterPro:Glyco_trans_31 | PFAM:PF01762 | PANTHER:PTHR11214 | PANTHER:PTHR11214:SF85 |
| TMHMM:TMhelix | UniParc:UPI00017B68F9 | EnsemblPlantsGene:Zm00001d009997 | EnsemblPlants:Zm00001d009997_P001 | EnsemblPlants:Zm00001d009997_T001 | SEG:seg |
Description
Probable beta-13-galactosyltransferase 12
Coordinates
chr8:-:93874492..93879026
Molecular Weight (calculated)
42049.7 Da
IEP (calculated)
7.054
GRAVY (calculated)
-0.414
Length
375 amino acids
Sequence
(BLAST)
(BLAST)
001: MPLHHPKHRH HDEDLLPYRR SDDEAKPRRP YTPTFPSSPA STNRLLLFFA VACLVLAAAS FAFAVSTSRN RQSLPQPPPT VAFRCGRAED SLRSFLAASS
101: HGNFSAGDRE KVLAVVGVHT EHGNFSAARR AALRATWFPL NPEGIVSLEH GTGLSFRFVA RRPKDKDKME DLQKEADTYH DFLFIDADEA TKPPQTMLAF
201: FKAAYHMFNA EFYVKASDDI YLRPDRLAAL LAKERPQHKT YIGCMKKGPV VNDPNLKWYE SSWELLGNEY FMHASGSLYA LSSEVVEALA TAKSDSLRMF
301: DYEDVTIGAW MLAMNVKHED NRAMCDSVCT PTSIAVWDSK KCSGTCNVAD KIKQLHNTTV CSKSPTLPPE VEEEE
101: HGNFSAGDRE KVLAVVGVHT EHGNFSAARR AALRATWFPL NPEGIVSLEH GTGLSFRFVA RRPKDKDKME DLQKEADTYH DFLFIDADEA TKPPQTMLAF
201: FKAAYHMFNA EFYVKASDDI YLRPDRLAAL LAKERPQHKT YIGCMKKGPV VNDPNLKWYE SSWELLGNEY FMHASGSLYA LSSEVVEALA TAKSDSLRMF
301: DYEDVTIGAW MLAMNVKHED NRAMCDSVCT PTSIAVWDSK KCSGTCNVAD KIKQLHNTTV CSKSPTLPPE VEEEE
001: MPLFSHRFTT ASSSSPASPS YYNKPSSKTH KPNSSSSSYT SSRIHVAIIF FSLVSVFIGV AGTIFALSST GPASVYRCGG SKDTSRVVSA SRKLGGDGGN
101: NGVVVERRKL LGFVGIQTGF DSGDRRTALR STWFPSDPDS LLRLEQATGL AFRFVIGKSK DAKKMAELEK EIKEYRDFVL LDTEEEYIRL PYKTLAFFKA
201: AFKLFEADYY VKADDDIYLR PDRLATLLAN ERLHSQTYIG CMKKGPVITD PKLKWYEKQG NLIGNEYFLH AYGPIYVLSA EIVASLAAAR NGSLRMFNNE
301: DVTIGSWMLA MDVHHEDNRA LCDPHCSPKS IAVWDIPKCS GLCDPESRLK ELHKTDMCSK SPTLPPDDID Q
101: NGVVVERRKL LGFVGIQTGF DSGDRRTALR STWFPSDPDS LLRLEQATGL AFRFVIGKSK DAKKMAELEK EIKEYRDFVL LDTEEEYIRL PYKTLAFFKA
201: AFKLFEADYY VKADDDIYLR PDRLATLLAN ERLHSQTYIG CMKKGPVITD PKLKWYEKQG NLIGNEYFLH AYGPIYVLSA EIVASLAAAR NGSLRMFNNE
301: DVTIGSWMLA MDVHHEDNRA LCDPHCSPKS IAVWDIPKCS GLCDPESRLK ELHKTDMCSK SPTLPPDDID Q
Arabidopsis Description
B3GALT12Hexosyltransferase [Source:UniProtKB/TrEMBL;Acc:A0A178VU65]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.