CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
mitochondrion 2
golgi 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra034289.1-P	Field mustard	plastid	99.45	99.45
CDY42221	Canola	cytosol	35.54	99.23
CDX77030	Canola	plastid	98.07	98.07
AT2G26100.1	Thale cress	plastid	86.78	84.91
VIT_04s0008g01270.t01	Wine grape	plastid	69.42	69.81
VIT_13s0158g00110.t01	Wine grape	cytosol	17.36	68.48
CDX97620	Canola	mitochondrion	54.82	58.19
CDX82456	Canola	mitochondrion	54.55	57.89
CDX98518	Canola	mitochondrion	55.92	57.83
CDY25866	Canola	mitochondrion	55.37	57.76
CDY55848	Canola	mitochondrion	55.37	57.76
CDY55849	Canola	mitochondrion	55.1	57.47
CDX75799	Canola	mitochondrion	53.72	57.02
GSMUA_Achr6P05430_001	Banana	endoplasmic reticulum, nucleus, plastid	56.47	54.52
Os05t0199500-01	Rice	mitochondrion	52.34	48.72
TraesCS1A01G125600.1	Wheat	cytosol, golgi, peroxisome	50.14	48.4
TraesCS1D01G127900.1	Wheat	cytosol, golgi, peroxisome	49.86	48.14
TraesCS1B01G144600.1	Wheat	cytosol, golgi, peroxisome	49.86	48.14
EES19194	Sorghum	golgi, peroxisome, plastid	48.21	46.67
Zm00001d009997_P001	Maize	plasma membrane	48.21	46.67
HORVU1Hr1G029110.2	Barley	cytosol, plasma membrane, plastid	49.59	40.09
CDX92791	Canola	cytosol	31.96	28.86
CDY46675	Canola	cytosol	32.23	28.54
CDX97371	Canola	cytosol, endoplasmic reticulum	31.13	27.9
CDY14294	Canola	cytosol, golgi	31.13	27.83
CDX96559	Canola	cytosol, nucleus, peroxisome	26.72	27.79
CDX93812	Canola	golgi	29.2	27.11
CDY46836	Canola	plastid	30.03	26.78
CDY30641	Canola	golgi	27.55	26.74
CDY04694	Canola	golgi	27.27	26.47
CDY49507	Canola	plastid	29.75	26.34
CDX97981	Canola	mitochondrion	28.1	26.09
CDY49800	Canola	mitochondrion	28.1	26.09
CDX96213	Canola	mitochondrion	23.97	25.97
CDY12206	Canola	golgi	29.2	25.92
CDX88390	Canola	golgi	27.27	25.92
CDY38836	Canola	golgi	27.82	25.9
CDY49171	Canola	mitochondrion	23.69	25.67
CDX87501	Canola	golgi	27.0	25.59
CDY11534	Canola	plastid	24.24	25.51
CDY48266	Canola	golgi	28.37	25.18
CDY35642	Canola	mitochondrion	23.42	25.15
CDY67379	Canola	vacuole	27.27	25.13
CDX73278	Canola	vacuole	27.27	25.13
CDY14386	Canola	mitochondrion	23.42	25.07
CDX75222	Canola	plastid	23.97	25.0
CDY58927	Canola	cytosol	23.69	25.0
CDY00412	Canola	golgi	27.27	24.94
CDX68818	Canola	plastid	23.97	24.93
CDY11037	Canola	golgi, mitochondrion, plastid	24.52	24.79
CDY68943	Canola	golgi	23.97	24.65
CDY54843	Canola	golgi	29.2	24.2
CDY01303	Canola	golgi	23.97	22.54

Protein Annotations

MapMan:21.4.1.1.5.3	GO:A0A078HC26	UniProt:A0A078HC26	EnsemblPlants:CDY35316	ProteinID:CDY35316	ProteinID:CDY35316.1
ncoils:Coil	GO:GO:0000139	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005794	GO:GO:0005975	GO:GO:0006464	GO:GO:0006486
GO:GO:0008150	GO:GO:0008152	GO:GO:0008378	GO:GO:0009058	GO:GO:0009987	GO:GO:0016020
GO:GO:0016021	GO:GO:0016740	GO:GO:0016757	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00058282001	InterPro:Glyco_trans_31
PFAM:PF01762	PANTHER:PTHR11214	PANTHER:PTHR11214:SF85	TMHMM:TMhelix	UniPathway:UPA00378	UniParc:UPI0004EF132F
SEG:seg	:	:	:	:	:

Description

BnaA04g15310DHexosyltransferase [Source:UniProtKB/TrEMBL;Acc:A0A078HC26]

Coordinates

chrLK032350:+:44643..46826

Molecular Weight (calculated)

40444.5 Da

IEP (calculated)

8.784

GRAVY (calculated)

-0.299

Length

363 amino acids

Sequence
(BLAST)

001: MPLFSHRFTT ASSTGPATPS YYSKPSKSHK HSSSASRVHV AIVLFSLVSL FIGLAGTIFA ITSSGGPSSV YRCGGSKDTS RVFGSRKLGG NGGVLPERRK
101: VIGLVGIQTG FDSGDRRAAL RSTWFPSDPD ALLRLEQATG LAFRFVIGRS KDEKKMAELE KEIKEHRDFV LLDDVEEDYL RLPYKTLAFF KAAFKLFEAD
201: YYVKADDDIY LRPDRLGTLL AKERLHSQTY IGCMKKGPVI TNPKLKWYEK QGNLIGNEYF LHAYGPMYVL SAEIVASLAS ARNSSLRMFN NEDVTIGSWM
301: LAMDVHHEDN RALCEPRCSP KSIAVWDIPK CSGLCNPESR LKELHNMEIC SKSPTLPPDD LDQ

Best Arabidopsis Sequence Match ( AT2G26100.1 )
(BLAST)

001: MPLFSHRFTT ASSSSPASPS YYNKPSSKTH KPNSSSSSYT SSRIHVAIIF FSLVSVFIGV AGTIFALSST GPASVYRCGG SKDTSRVVSA SRKLGGDGGN
101: NGVVVERRKL LGFVGIQTGF DSGDRRTALR STWFPSDPDS LLRLEQATGL AFRFVIGKSK DAKKMAELEK EIKEYRDFVL LDTEEEYIRL PYKTLAFFKA
201: AFKLFEADYY VKADDDIYLR PDRLATLLAN ERLHSQTYIG CMKKGPVITD PKLKWYEKQG NLIGNEYFLH AYGPIYVLSA EIVASLAAAR NGSLRMFNNE
301: DVTIGSWMLA MDVHHEDNRA LCDPHCSPKS IAVWDIPKCS GLCDPESRLK ELHKTDMCSK SPTLPPDDID Q

Arabidopsis Description

B3GALT12Hexosyltransferase [Source:UniProtKB/TrEMBL;Acc:A0A178VU65]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.