CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 1
plastid 1
mitochondrion 4
golgi 1
vacuole 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra019835.1-P	Field mustard	mitochondrion	98.21	98.21
CDY49800	Canola	mitochondrion	97.7	97.7
AT1G11730.1	Thale cress	golgi, mitochondrion	84.65	86.2
Os02t0164300-02	Rice	cytosol	33.5	71.98
KRH51094	Soybean	cytosol	55.24	62.61
KRH02065	Soybean	golgi, mitochondrion	58.82	61.5
VIT_10s0116g01710.t01	Wine grape	cytosol	63.94	61.27
CDX97371	Canola	cytosol, endoplasmic reticulum	61.13	59.01
CDX92791	Canola	cytosol	60.61	58.96
CDY46836	Canola	plastid	61.13	58.72
Zm00001d053825_P002	Maize	golgi	60.36	58.71
CDY14294	Canola	cytosol, golgi	60.87	58.62
CDY49507	Canola	plastid	61.38	58.54
CDY48266	Canola	golgi	61.13	58.44
GSMUA_Achr5P00690_001	Banana	golgi	59.59	58.1
CDY12206	Canola	golgi	60.61	57.95
EES04570	Sorghum	golgi	59.34	57.71
CDY46675	Canola	cytosol	60.36	57.56
HORVU6Hr1G026680.2	Barley	golgi	58.82	57.5
Os06t0679500-01	Rice	golgi	58.06	57.47
CDX88390	Canola	golgi	56.01	57.33
TraesCS6A01G138100.1	Wheat	golgi	58.57	57.25
TraesCS6B01G166400.1	Wheat	golgi	58.57	57.25
TraesCS6D01G127200.1	Wheat	golgi	58.57	57.25
CDX87501	Canola	golgi	55.5	56.66
HORVU7Hr1G105510.13	Barley	golgi	56.78	56.2
TraesCS7D01G446600.1	Wheat	golgi	56.78	55.92
CDY30641	Canola	golgi	53.2	55.62
CDY04694	Canola	golgi	53.2	55.62
TraesCS7A01G458600.1	Wheat	golgi	57.29	55.58
CDX96559	Canola	cytosol, nucleus, peroxisome	49.36	55.3
EER88815	Sorghum	golgi	56.52	55.25
TraesCS7B01G358000.2	Wheat	golgi	57.29	54.77
CDX93812	Canola	golgi	54.48	54.48
GSMUA_Achr9P30290_001	Banana	cytosol	58.31	54.03
Zm00001d014361_P001	Maize	golgi	56.27	52.76
CDY38836	Canola	golgi	52.17	52.31
CDY68943	Canola	golgi	47.06	52.12
CDX73278	Canola	vacuole	51.92	51.52
CDY67379	Canola	vacuole	51.92	51.52
CDY00412	Canola	golgi	52.17	51.39
CDY11037	Canola	golgi, mitochondrion, plastid	46.8	50.97
CDY01303	Canola	golgi	48.59	49.22
CDY54843	Canola	golgi	54.99	49.09
CDX96213	Canola	mitochondrion	34.02	39.7
CDY49171	Canola	mitochondrion	34.02	39.7
CDY35642	Canola	mitochondrion	34.27	39.65
CDY14386	Canola	mitochondrion	34.27	39.53
CDY58927	Canola	cytosol	32.48	36.92
CDY11534	Canola	plastid	32.23	36.52
CDX75222	Canola	plastid	31.71	35.63
CDX68818	Canola	plastid	31.71	35.53
CDY42221	Canola	cytosol	10.49	31.54
CDX97620	Canola	mitochondrion	27.11	30.99
CDX75799	Canola	mitochondrion	26.6	30.41
CDX98518	Canola	mitochondrion	26.85	29.91
CDX82456	Canola	mitochondrion	26.09	29.82
CDY55849	Canola	mitochondrion	26.34	29.6
CDY55848	Canola	mitochondrion	26.34	29.6
CDY25866	Canola	mitochondrion	26.09	29.31
CDY35316	Canola	plastid	26.09	28.1
CDX77030	Canola	plastid	25.83	27.82

Protein Annotations

MapMan:21.4.1.1.5.3	Gene3D:3.90.550.50	GO:A0A078E9V1	EnsemblPlants:CDX97981	ProteinID:CDX97981	ProteinID:CDX97981.1
ncoils:Coil	InterPro:DUF4094	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005975
GO:GO:0006464	GO:GO:0006486	GO:GO:0008150	GO:GO:0008152	GO:GO:0008378	GO:GO:0009058
GO:GO:0009987	GO:GO:0016020	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00105336001	InterPro:Glyco_trans_31
PFAM:PF01762	PFAM:PF13334	PANTHER:PTHR11214	PANTHER:PTHR11214:SF216	TMHMM:TMhelix	UniPathway:UPA00378
UniParc:UPI0004EEBBD8	SEG:seg	:	:	:	:

Description

BnaA06g07320D

Coordinates

chrLK031902:+:346232..349128

Molecular Weight (calculated)

44081.8 Da

IEP (calculated)

8.655

GRAVY (calculated)

-0.293

Length

391 amino acids

Sequence
(BLAST)

001: MSFKNRGGGS FGDHYFTPRN VVSRNSVFFF CIASFCLGMF FSNRMWNVPE GRGISTLSKL SLKSGDHVQN KNLVLEYGNN TIGILDKSIA SLEMKLVAAK
101: AERESLSGKF SMSEEAKKRK YFMVIGINTA FSSRKRRDSV RSTWMPQGEK LKKLEEEKGI VVRFVIGHST LSLGVLEKAI EAEEKTYGDF LRLEHREGYM
201: ALSAKTKTFF ATAVSLWDAE FYIKVDDDVH VNLATLKATL SSHRNKPRAY IGCMKSGPVL AIKGVKYHEP EYWNFGEIGN RYFRHATGQF YAISKDLATY
301: ILINQDLLHK YANEDVSLGS WFIGLDVEHV NDRRLCCSTS PHDCQLKAMM GDVCAASFDW KCSGICQSAE RMADVHERCG EPETALWTSS S

Best Arabidopsis Sequence Match ( AT1G11730.1 )
(BLAST)

001: MSFKNRGDYN FTPRNVVSRN SVFFMCLASF CLGMFFTNRM WNIVPEARGI SRLSKLSLSS SDCDKKNVLD YGNNTIGILD KSISNLEMKL VAARAERESL
101: SGKFNISNEA KKRKYFMVIG INTAFSSRKR RDSVRSTWMP QGENLKKLEE EKGIIVRFVI GHSVLSHGIL DKAIEAEEKT HGDFLRLEHT EGYMKLSAKT
201: KTFFATAVSL WDAEFYIKVD DDVHVNLASL KKALSAHQNK PRVYVGCMKS GPVLARKSVK YHEPEYWKFG EVGNKYFRHA TGQFYAISKD LATYILINQD
301: LLHKYANEDV SLGSWFIGLN VEHVDEKRLC CSTSQDCELK AMMGHVCAAS FDWKCSGICR SAERMADVHE RCGEPQNALW TSNS

Arabidopsis Description

B3GALT1Hexosyltransferase (Fragment) [Source:UniProtKB/TrEMBL;Acc:W8Q7D4]
SUBAcon: [mitochondrion,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.