Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, golgi
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 3
- golgi 3
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY49800 | Canola | mitochondrion | 87.24 | 85.68 |
| Bra019835.1-P | Field mustard | mitochondrion | 86.98 | 85.42 |
| CDX97981 | Canola | mitochondrion | 86.2 | 84.65 |
| Os02t0164300-02 | Rice | cytosol | 33.33 | 70.33 |
| KRH51094 | Soybean | cytosol | 58.33 | 64.93 |
| KRH02065 | Soybean | golgi, mitochondrion | 61.46 | 63.1 |
| VIT_10s0116g01710.t01 | Wine grape | cytosol | 66.93 | 62.99 |
| AT1G05170.2 | Thale cress | cytosol, golgi | 63.02 | 59.46 |
| GSMUA_Achr5P00690_001 | Banana | golgi | 61.98 | 59.35 |
| AT2G32430.1 | Thale cress | golgi | 62.76 | 58.92 |
| AT4G26940.1 | Thale cress | endoplasmic reticulum, golgi | 62.24 | 58.72 |
| Zm00001d053825_P002 | Maize | golgi | 61.2 | 58.46 |
| HORVU6Hr1G026680.2 | Barley | golgi | 60.68 | 58.25 |
| TraesCS6A01G138100.1 | Wheat | golgi | 60.42 | 58.0 |
| TraesCS6B01G166400.1 | Wheat | golgi | 60.42 | 58.0 |
| TraesCS6D01G127200.1 | Wheat | golgi | 60.42 | 58.0 |
| AT1G77810.1 | Thale cress | golgi | 58.33 | 57.88 |
| EES04570 | Sorghum | golgi | 60.42 | 57.71 |
| Os06t0679500-01 | Rice | golgi | 58.85 | 57.22 |
| TraesCS7D01G446600.1 | Wheat | golgi | 59.11 | 57.18 |
| HORVU7Hr1G105510.13 | Barley | golgi | 58.59 | 56.96 |
| EER88815 | Sorghum | golgi | 59.11 | 56.75 |
| TraesCS7A01G458600.1 | Wheat | golgi | 59.11 | 56.33 |
| TraesCS7B01G358000.2 | Wheat | golgi | 59.11 | 55.5 |
| GSMUA_Achr9P30290_001 | Banana | cytosol | 60.16 | 54.74 |
| Zm00001d014361_P001 | Maize | golgi | 58.85 | 54.2 |
| AT1G32930.1 | Thale cress | golgi | 56.25 | 54.14 |
| AT1G22015.1 | Thale cress | golgi | 53.39 | 51.51 |
| AT1G33430.2 | Thale cress | golgi, vacuole | 53.91 | 51.36 |
| AT5G53340.1 | Thale cress | mitochondrion | 34.9 | 39.65 |
| AT2G25300.1 | Thale cress | plastid | 32.03 | 35.55 |
| AT4G32120.1 | Thale cress | golgi, nucleus, peroxisome | 31.25 | 34.78 |
| AT3G14960.1 | Thale cress | mitochondrion | 28.39 | 31.78 |
| AT1G53290.1 | Thale cress | mitochondrion | 27.34 | 30.43 |
| AT2G26100.1 | Thale cress | plastid | 25.52 | 26.42 |
Protein Annotations
| MapMan:21.4.1.1.5.3 | Gene3D:3.90.550.50 | EntrezGene:837717 | ProteinID:AAD30250.1 | ProteinID:AEE28776.1 | ArrayExpress:AT1G11730 |
| EnsemblPlantsGene:AT1G11730 | RefSeq:AT1G11730 | TAIR:AT1G11730 | RefSeq:AT1G11730-TAIR-G | EnsemblPlants:AT1G11730.1 | TAIR:AT1G11730.1 |
| ncoils:Coil | InterPro:DUF4094 | GO:GO:0000139 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005794 | GO:GO:0005975 | GO:GO:0006464 |
| GO:GO:0006486 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008378 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016740 | GO:GO:0016757 | GO:GO:0019538 | InterPro:Glyco_trans_31 |
| EMBL:KJ139014 | RefSeq:NP_172638.1 | PFAM:PF01762 | PFAM:PF13334 | PO:PO:0000013 | PO:PO:0000037 |
| PO:PO:0000191 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 |
| PO:PO:0004507 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 |
| PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 |
| PO:PO:0009046 | PO:PO:0009052 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 |
| PANTHER:PTHR11214 | PANTHER:PTHR11214:SF216 | UniProt:Q9SAA4 | TMHMM:TMhelix | UniParc:UPI0000162D28 | UniProt:W8Q7D4 |
| SEG:seg | : | : | : | : | : |
Description
B3GALT1Hexosyltransferase (Fragment) [Source:UniProtKB/TrEMBL;Acc:W8Q7D4]
Coordinates
chr1:+:3957284..3960464
Molecular Weight (calculated)
43624.3 Da
IEP (calculated)
9.068
GRAVY (calculated)
-0.356
Length
384 amino acids
Sequence
(BLAST)
(BLAST)
001: MSFKNRGDYN FTPRNVVSRN SVFFMCLASF CLGMFFTNRM WNIVPEARGI SRLSKLSLSS SDCDKKNVLD YGNNTIGILD KSISNLEMKL VAARAERESL
101: SGKFNISNEA KKRKYFMVIG INTAFSSRKR RDSVRSTWMP QGENLKKLEE EKGIIVRFVI GHSVLSHGIL DKAIEAEEKT HGDFLRLEHT EGYMKLSAKT
201: KTFFATAVSL WDAEFYIKVD DDVHVNLASL KKALSAHQNK PRVYVGCMKS GPVLARKSVK YHEPEYWKFG EVGNKYFRHA TGQFYAISKD LATYILINQD
301: LLHKYANEDV SLGSWFIGLN VEHVDEKRLC CSTSQDCELK AMMGHVCAAS FDWKCSGICR SAERMADVHE RCGEPQNALW TSNS
101: SGKFNISNEA KKRKYFMVIG INTAFSSRKR RDSVRSTWMP QGENLKKLEE EKGIIVRFVI GHSVLSHGIL DKAIEAEEKT HGDFLRLEHT EGYMKLSAKT
201: KTFFATAVSL WDAEFYIKVD DDVHVNLASL KKALSAHQNK PRVYVGCMKS GPVLARKSVK YHEPEYWKFG EVGNKYFRHA TGQFYAISKD LATYILINQD
301: LLHKYANEDV SLGSWFIGLN VEHVDEKRLC CSTSQDCELK AMMGHVCAAS FDWKCSGICR SAERMADVHE RCGEPQNALW TSNS
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.