Subcellular Localization
min:
: max
Winner_takes_all: golgi, cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 3
- golgi 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY46836 | Canola | plastid | 89.93 | 89.93 |
| CDY49507 | Canola | plastid | 90.17 | 89.51 |
| AT2G32430.1 | Thale cress | golgi | 86.24 | 85.82 |
| Bra015395.1-P | Field mustard | plastid | 87.72 | 83.8 |
| VIT_12s0059g00640.t01 | Wine grape | golgi | 80.34 | 80.34 |
| KRH56140 | Soybean | golgi, mitochondrion | 78.38 | 78.38 |
| Solyc07g052320.2.1 | Tomato | mitochondrion, plastid | 78.13 | 77.94 |
| PGSC0003DMT400074517 | Potato | cytosol, golgi, mitochondrion, vacuole | 77.89 | 77.7 |
| KRH26781 | Soybean | golgi, plasma membrane | 77.4 | 77.4 |
| KRH25371 | Soybean | golgi, mitochondrion | 77.15 | 77.34 |
| KRH22570 | Soybean | golgi | 77.15 | 77.15 |
| Solyc12g005880.1.1 | Tomato | plastid | 72.24 | 74.43 |
| GSMUA_Achr4P33450_001 | Banana | golgi | 73.22 | 73.95 |
| PGSC0003DMT400022537 | Potato | plastid | 71.99 | 73.8 |
| GSMUA_Achr7P00260_001 | Banana | golgi | 73.22 | 73.4 |
| AT4G26940.1 | Thale cress | endoplasmic reticulum, golgi | 72.97 | 72.97 |
| Os03t0577500-01 | Rice | golgi, peroxisome, plastid | 71.74 | 71.92 |
| GSMUA_Achr4P23710_001 | Banana | golgi | 72.73 | 71.67 |
| TraesCS7B01G241500.2 | Wheat | cytosol, golgi, mitochondrion, nucleus | 70.02 | 71.25 |
| HORVU7Hr1G081720.2 | Barley | cytosol | 69.78 | 71.18 |
| TraesCS7D01G339200.1 | Wheat | cytosol, golgi, mitochondrion, plastid | 69.78 | 71.0 |
| EER91307 | Sorghum | golgi, peroxisome, plasma membrane | 71.25 | 70.9 |
| TraesCS7A01G330900.1 | Wheat | cytosol, golgi, mitochondrion, plastid | 69.29 | 70.5 |
| Zm00001d013804_P003 | Maize | golgi, plastid, vacuole | 70.27 | 68.75 |
| AT1G11730.1 | Thale cress | golgi, mitochondrion | 59.46 | 63.02 |
| AT1G77810.1 | Thale cress | golgi | 58.72 | 61.76 |
| AT1G32930.1 | Thale cress | golgi | 57.99 | 59.15 |
| AT1G33430.2 | Thale cress | golgi, vacuole | 55.28 | 55.83 |
| AT1G22015.1 | Thale cress | golgi | 52.58 | 53.77 |
| AT5G53340.1 | Thale cress | mitochondrion | 34.15 | 41.12 |
| AT4G32120.1 | Thale cress | golgi, nucleus, peroxisome | 30.71 | 36.23 |
| AT2G25300.1 | Thale cress | plastid | 30.71 | 36.13 |
| AT3G14960.1 | Thale cress | mitochondrion | 25.31 | 30.03 |
| AT1G53290.1 | Thale cress | mitochondrion | 25.06 | 29.57 |
| AT2G26100.1 | Thale cress | plastid | 25.8 | 28.3 |
Protein Annotations
| MapMan:21.4.1.1.5.3 | Gene3D:3.90.550.50 | EntrezGene:839292 | UniProt:A8MRC7 | ProteinID:AAB71461.1 | ProteinID:AEE27798.1 |
| EMBL:AF389287 | ArrayExpress:AT1G05170 | EnsemblPlantsGene:AT1G05170 | RefSeq:AT1G05170 | TAIR:AT1G05170 | RefSeq:AT1G05170-TAIR-G |
| EnsemblPlants:AT1G05170.2 | TAIR:AT1G05170.2 | EMBL:AY113007 | Unigene:At.10413 | ncoils:Coil | InterPro:DUF4094 |
| GO:GO:0000139 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005794 | GO:GO:0005975 | GO:GO:0006464 | GO:GO:0006486 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0008378 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0016740 | GO:GO:0016757 | GO:GO:0019538 | InterPro:Glyco_trans_31 | EMBL:KJ139030 | RefSeq:NP_001077462.1 |
| PFAM:PF01762 | PFAM:PF13334 | PO:PO:0000013 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 |
| PO:PO:0001078 | PO:PO:0001185 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0009005 | PO:PO:0009009 |
| PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 |
| PO:PO:0009046 | PO:PO:0009047 | PO:PO:0025022 | PO:PO:0025281 | PANTHER:PTHR11214 | PANTHER:PTHR11214:SF208 |
| TMHMM:TMhelix | UniParc:UPI00015054B3 | UniProt:W8Q3U9 | SEG:seg | : | : |
Description
B3GALT2Hexosyltransferase (Fragment) [Source:UniProtKB/TrEMBL;Acc:W8Q3U9]
Coordinates
chr1:-:1490974..1494248
Molecular Weight (calculated)
46164.2 Da
IEP (calculated)
8.952
GRAVY (calculated)
-0.455
Length
407 amino acids
Sequence
(BLAST)
(BLAST)
001: MSAKIKGEYS SRSFVSRKWT ILLCLGSFCV GMFFTNRMWN IPESKGMSHP SVTEAERLKL VSEGCNPKAL YQKEVKRDPQ ALFGEVANTH IALQTLDKTI
101: SSLEMELAAA RSVQESLQNG APLSDDMGKK QPQEQRRFLM VVGINTAFSS RKRRDSIRAT WMPQGEKRKR LEEEKGIIIR FVIGHSATTG GILDRAIEAE
201: DRKHGDFLRL DHVEGYLELS GKTKTYFSTA FSMWDADFYV KVDDDVHVNI ATLGETLVRH RKKPRVYIGC MKSGPVLSQK GVRYHEPEYW KFGENGNKYF
301: RHATGQLYAI SRDLASYISI NQHVLHKYAN EDVSLGAWFI GIDVKHIDDR RLCCGTPPDC EWKAQAGNIC VASFDWSCSG ICRSADRIKE VHRRCGEGEK
401: ALWSATF
101: SSLEMELAAA RSVQESLQNG APLSDDMGKK QPQEQRRFLM VVGINTAFSS RKRRDSIRAT WMPQGEKRKR LEEEKGIIIR FVIGHSATTG GILDRAIEAE
201: DRKHGDFLRL DHVEGYLELS GKTKTYFSTA FSMWDADFYV KVDDDVHVNI ATLGETLVRH RKKPRVYIGC MKSGPVLSQK GVRYHEPEYW KFGENGNKYF
301: RHATGQLYAI SRDLASYISI NQHVLHKYAN EDVSLGAWFI GIDVKHIDDR RLCCGTPPDC EWKAQAGNIC VASFDWSCSG ICRSADRIKE VHRRCGEGEK
401: ALWSATF
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.