CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, golgi

Predictor Summary:

plastid 3
mitochondrion 4
golgi 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH56140	Soybean	golgi, mitochondrion	97.54	97.3
KRH26781	Soybean	golgi, plasma membrane	84.98	84.77
KRH22570	Soybean	golgi	84.48	84.28
VIT_12s0059g00640.t01	Wine grape	golgi	82.27	82.06
AT1G05170.2	Thale cress	cytosol, golgi	77.34	77.15
CDY46836	Canola	plastid	77.34	77.15
CDY49507	Canola	plastid	77.83	77.07
PGSC0003DMT400074517	Potato	cytosol, golgi, mitochondrion, vacuole	77.09	76.72
Solyc07g052320.2.1	Tomato	mitochondrion, plastid	77.09	76.72
PGSC0003DMT400022537	Potato	plastid	74.38	76.07
CDY48266	Canola	golgi	75.86	75.31
Bra005595.1-P	Field mustard	golgi	75.86	75.31
AT2G32430.1	Thale cress	golgi	75.62	75.06
Solyc12g005880.1.1	Tomato	plastid	72.91	74.94
CDY12206	Canola	golgi	75.12	74.57
GSMUA_Achr4P33450_001	Banana	golgi	73.89	74.44
GSMUA_Achr4P23710_001	Banana	golgi	75.37	74.09
GSMUA_Achr7P00260_001	Banana	golgi	73.4	73.4
EER91307	Sorghum	golgi, peroxisome, plasma membrane	72.41	71.88
Bra015395.1-P	Field mustard	plastid	75.12	71.6
KRH02065	Soybean	golgi, mitochondrion	65.76	71.39
KRH51094	Soybean	cytosol	60.1	70.72
Os03t0577500-01	Rice	golgi, peroxisome, plastid	70.69	70.69
HORVU7Hr1G081720.2	Barley	cytosol	69.21	70.43
TraesCS7B01G241500.2	Wheat	cytosol, golgi, mitochondrion, nucleus	69.21	70.25
TraesCS7A01G330900.1	Wheat	cytosol, golgi, mitochondrion, plastid	68.97	70.0
TraesCS7D01G339200.1	Wheat	cytosol, golgi, mitochondrion, plastid	68.72	69.75
Zm00001d013804_P003	Maize	golgi, plastid, vacuole	70.94	69.23
KRH18826	Soybean	endoplasmic reticulum	63.05	64.48
KRH64756	Soybean	golgi	62.32	63.73
KRH16620	Soybean	mitochondrion	62.07	63.48
KRH53153	Soybean	vacuole	61.58	63.45
KRH23776	Soybean	golgi, vacuole	54.68	58.73
KRH40026	Soybean	golgi	54.68	58.12
KRH53422	Soybean	mitochondrion	35.71	42.27
KRH64518	Soybean	mitochondrion	34.98	41.4
KRH27862	Soybean	mitochondrion	34.48	40.82
KRH05191	Soybean	mitochondrion, plastid	29.8	37.93
KRH15831	Soybean	mitochondrion	33.74	34.34
KRH21986	Soybean	mitochondrion	25.12	30.36
KRH55102	Soybean	plastid	24.38	29.29
KRH26222	Soybean	plastid	24.14	28.99

Protein Annotations

EntrezGene:100776912	MapMan:21.4.1.1.5.3	Gene3D:3.90.550.50	EMBL:ACUP02007247	ncoils:Coil	InterPro:DUF4094
EnsemblPlantsGene:GLYMA_12G098600	GO:GO:0000139	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005794	GO:GO:0005975	GO:GO:0006464	GO:GO:0006486
GO:GO:0008150	GO:GO:0008152	GO:GO:0008378	GO:GO:0009058	GO:GO:0009987	GO:GO:0016020
GO:GO:0016021	GO:GO:0016740	GO:GO:0016757	GO:GO:0019538	InterPro:Glyco_trans_31	UniProt:I1LRQ0
EnsemblPlants:KRH25371	ProteinID:KRH25371	ProteinID:KRH25371.1	PFAM:PF01762	PFAM:PF13334	PANTHER:PTHR11214
PANTHER:PTHR11214:SF5	TMHMM:TMhelix	UniParc:UPI000233C42C	:	:	:

Description

hypothetical protein

Coordinates

chr12:-:8486135..8491192

Molecular Weight (calculated)

45883.6 Da

IEP (calculated)

8.344

GRAVY (calculated)

-0.413

Length

406 amino acids

Sequence
(BLAST)

001: MTWKSRGELP SRSVISQRWA LFLCLGSFCA GMLFTTRIWT IPENNKGLAR PTASEAEKLS LVSEGCNSRI LQEMEMKHDK DTYGEVFKSH NSIQTLDKAI
101: SNLEMELAAA RATQESLRSG APISDDIRLS ESSGKRKYLM VIGINTAFSS RKRRDSVRST WMLQGEKRKK LEEKGIIMRF VIGHSATSGG ILDRAIEAED
201: RKHGDFLRLN HVEGYLELSA KTKTYFATAV NLWDADFYVK VDDDVHVNIA TLGETLVRHR SKPRIYIGCM KSGPVLSQKG VRYHEPEYWK FGEAGNRYFR
301: HATGQLYAIS NDLATYISIN QNVLHKYANE DVSLGSWFIG LDVEHIDDRR LCCGTPPDCE WKAQAGNICV ASFDWSCSGI CRSAERIKEV HRRCGEGENV
401: LWSASF

Best Arabidopsis Sequence Match ( AT1G05170.2 )
(BLAST)

001: MSAKIKGEYS SRSFVSRKWT ILLCLGSFCV GMFFTNRMWN IPESKGMSHP SVTEAERLKL VSEGCNPKAL YQKEVKRDPQ ALFGEVANTH IALQTLDKTI
101: SSLEMELAAA RSVQESLQNG APLSDDMGKK QPQEQRRFLM VVGINTAFSS RKRRDSIRAT WMPQGEKRKR LEEEKGIIIR FVIGHSATTG GILDRAIEAE
201: DRKHGDFLRL DHVEGYLELS GKTKTYFSTA FSMWDADFYV KVDDDVHVNI ATLGETLVRH RKKPRVYIGC MKSGPVLSQK GVRYHEPEYW KFGENGNKYF
301: RHATGQLYAI SRDLASYISI NQHVLHKYAN EDVSLGAWFI GIDVKHIDDR RLCCGTPPDC EWKAQAGNIC VASFDWSCSG ICRSADRIKE VHRRCGEGEK
401: ALWSATF

Arabidopsis Description

B3GALT2Hexosyltransferase (Fragment) [Source:UniProtKB/TrEMBL;Acc:W8Q3U9]
SUBAcon: [golgi,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.