CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 4
golgi 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH53422	Soybean	mitochondrion	96.21	96.21
GSMUA_Achr4P00940_001	Banana	mitochondrion	70.55	71.81
CDY14386	Canola	mitochondrion	70.55	71.39
CDY35642	Canola	mitochondrion	69.97	71.01
AT5G53340.1	Thale cress	mitochondrion	69.97	71.01
Bra003064.1-P	Field mustard	mitochondrion	68.51	70.57
CDX96213	Canola	mitochondrion	68.51	70.15
VIT_16s0050g02460.t01	Wine grape	mitochondrion	69.68	69.88
CDY49171	Canola	mitochondrion	67.93	69.55
KRH27862	Soybean	mitochondrion	67.06	67.06
EES13774	Sorghum	mitochondrion	67.64	67.05
Os08t0386700-01	Rice	mitochondrion	66.76	66.76
HORVU7Hr1G063510.5	Barley	mitochondrion	66.76	66.19
TraesCS7D01G286500.1	Wheat	mitochondrion	66.47	66.09
PGSC0003DMT400023412	Potato	mitochondrion	67.35	65.81
TraesCS7A01G293200.1	Wheat	mitochondrion	66.18	65.8
TraesCS7B01G185900.1	Wheat	mitochondrion	65.6	65.22
Bra022647.1-P	Field mustard	mitochondrion	66.76	56.82
Zm00001d050251_P002	Maize	mitochondrion	63.85	53.94
Zm00001d032267_P003	Maize	mitochondrion	59.48	50.25
KRH05191	Soybean	mitochondrion, plastid	38.19	41.07
KRH51094	Soybean	cytosol	37.03	36.81
KRH15831	Soybean	mitochondrion	42.27	36.34
KRH25371	Soybean	golgi, mitochondrion	41.4	34.98
KRH02065	Soybean	golgi, mitochondrion	37.9	34.76
KRH56140	Soybean	golgi, mitochondrion	41.11	34.64
KRH26781	Soybean	golgi, plasma membrane	40.82	34.4
KRH22570	Soybean	golgi	40.52	34.15
KRH40026	Soybean	golgi	37.9	34.03
KRH53153	Soybean	vacuole	39.07	34.01
KRH16620	Soybean	mitochondrion	39.36	34.01
KRH64756	Soybean	golgi	39.07	33.75
KRH18826	Soybean	endoplasmic reticulum	39.07	33.75
KRH23776	Soybean	golgi, vacuole	36.73	33.33
KRH55102	Soybean	plastid	25.07	25.44
KRH26222	Soybean	plastid	24.78	25.15
KRH21986	Soybean	mitochondrion	24.2	24.7

Protein Annotations

EntrezGene:100779561	MapMan:18.1.2.1.2	Gene3D:3.90.550.50	EMBL:ACUP02002767	ncoils:Coil	InterPro:DUF4094
EnsemblPlantsGene:GLYMA_04G239300	GO:GO:0000139	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005794	GO:GO:0005975	GO:GO:0006464	GO:GO:0006486
GO:GO:0008150	GO:GO:0008152	GO:GO:0008378	GO:GO:0009058	GO:GO:0009987	GO:GO:0016020
GO:GO:0016021	GO:GO:0016740	GO:GO:0016757	GO:GO:0019538	InterPro:Glyco_trans_31	UniProt:I1JYW0
EnsemblPlants:KRH64518	ProteinID:KRH64518	ProteinID:KRH64518.1	PFAM:PF01762	PFAM:PF13334	PANTHER:PTHR11214
PANTHER:PTHR11214:SF224	TMHMM:TMhelix	UniParc:UPI000233A094	:	:	:

Description

hypothetical protein

Coordinates

chr4:-:50776561..50781301

Molecular Weight (calculated)

38718.2 Da

IEP (calculated)

8.874

GRAVY (calculated)

-0.336

Length

343 amino acids

Sequence
(BLAST)

001: MQIRGSSHRL SSMGNNRSRI PALLISMFAT FASIYVAGRL WQDAENRVYL IKELDRITGQ GQSAISVDDT LKIIACREQH KKLDAIETEL AGARQEGFVS
101: KPLIETNGTY SMRRPLVVIG ILTKFGRQKN RDAIRKAWMG SGASLKKIEE GKGIIVQFVI GRSENRGDNQ DKDIDRENRL TNDFIILDNH VETNDAFPKK
201: AKLFFAHAAD KWDAEFYAKV NDDVYVNIDA LGATLATHLD KPRVYMGCMK SGEVFSELNH KWYEPEWWKF GDKKSYFRHA SGEMYVISQA LAKFISINRS
301: ILRTYAHDDV SAGSWFIGLD VKHVDEAKFC CSSWSTGAIC AGV

Best Arabidopsis Sequence Match ( AT5G53340.1 )
(BLAST)

001: MARKGSSIRL SSSRISTLLL FMFATFASFY VAGRLWQESQ TRVHLINELD RVTGQGKSAI SVDDTLKIIA CREQKKTLAA LEMELSSARQ EGFVSKSPKL
101: ADGTETKKRP LVVIGIMTSL GNKKKRDAVR QAWMGTGASL KKLESEKGVI ARFVIGRSAN KGDSMDKSID TENSQTDDFI ILDDVVEAPE EASKKVKLFF
201: AYAADRWDAQ FYAKAIDNIY VNIDALGTTL AAHLENPRAY IGCMKSGEVF SEPNHKWYEP EWWKFGDKKA YFRHAYGEMY VITHALARFV SINRDILHSY
301: AHDDVSTGSW FVGLDVKHVD EGKFCCSAWS SEAICAGV

Arabidopsis Description

HPTG1Hydroxyproline O-galactosyltransferase HPGT1 [Source:UniProtKB/Swiss-Prot;Acc:Q94F27]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.