CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, golgi

Predictor Summary:

plastid 2
mitochondrion 4
golgi 2
plasma membrane 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH51094	Soybean	cytosol	82.89	89.86
Os02t0164300-02	Rice	cytosol	38.77	79.67
VIT_10s0116g01710.t01	Wine grape	cytosol	72.46	66.42
KRH56140	Soybean	golgi, mitochondrion	71.66	65.85
KRH25371	Soybean	golgi, mitochondrion	71.39	65.76
KRH26781	Soybean	golgi, plasma membrane	70.32	64.62
KRH22570	Soybean	golgi	69.52	63.88
AT1G11730.1	Thale cress	golgi, mitochondrion	63.1	61.46
GSMUA_Achr5P00690_001	Banana	golgi	65.78	61.35
Zm00001d053825_P002	Maize	golgi	64.44	59.95
EES04570	Sorghum	golgi	64.44	59.95
Bra019835.1-P	Field mustard	mitochondrion	62.03	59.34
CDY49800	Canola	mitochondrion	61.76	59.08
CDX97981	Canola	mitochondrion	61.5	58.82
EER88815	Sorghum	golgi	62.57	58.5
GSMUA_Achr9P30290_001	Banana	cytosol	65.78	58.29
HORVU6Hr1G026680.2	Barley	golgi	62.3	58.25
Os06t0679500-01	Rice	golgi	61.5	58.23
TraesCS6D01G127200.1	Wheat	golgi	62.03	58.0
TraesCS6B01G166400.1	Wheat	golgi	62.03	58.0
TraesCS6A01G138100.1	Wheat	golgi	62.03	58.0
HORVU7Hr1G105510.13	Barley	golgi	60.96	57.72
KRH18826	Soybean	endoplasmic reticulum	61.23	57.68
TraesCS7D01G446600.1	Wheat	golgi	61.23	57.68
KRH16620	Soybean	mitochondrion	60.7	57.18
TraesCS7A01G458600.1	Wheat	golgi	61.23	56.82
KRH64756	Soybean	golgi	59.89	56.42
TraesCS7B01G358000.2	Wheat	golgi	61.5	56.23
Zm00001d014361_P001	Maize	golgi	62.57	56.12
KRH53153	Soybean	vacuole	58.82	55.84
KRH23776	Soybean	golgi, vacuole	53.74	53.17
KRH40026	Soybean	golgi	54.01	52.88
KRH53422	Soybean	mitochondrion	35.03	38.19
KRH64518	Soybean	mitochondrion	34.76	37.9
KRH27862	Soybean	mitochondrion	34.76	37.9
KRH05191	Soybean	mitochondrion, plastid	28.88	33.86
KRH21986	Soybean	mitochondrion	28.34	31.55
KRH15831	Soybean	mitochondrion	32.35	30.33
KRH26222	Soybean	plastid	27.01	29.88
KRH55102	Soybean	plastid	26.74	29.59

Protein Annotations

EntrezGene:100810168	MapMan:21.4.1.1.5.3	Gene3D:3.90.550.50	EMBL:ACUP02010293	InterPro:DUF4094	EnsemblPlantsGene:GLYMA_17G013200
GO:GO:0000139	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005794	GO:GO:0005975	GO:GO:0006464	GO:GO:0006486	GO:GO:0008150
GO:GO:0008152	GO:GO:0008378	GO:GO:0009058	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021
GO:GO:0016740	GO:GO:0016757	GO:GO:0019538	InterPro:Glyco_trans_31	UniProt:I1MR54	EnsemblPlants:KRH02065
ProteinID:KRH02065	ProteinID:KRH02065.1	PFAM:PF01762	PFAM:PF13334	PANTHER:PTHR11214	PANTHER:PTHR11214:SF216
TMHMM:TMhelix	UniParc:UPI000233EF3C	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr17:-:1002915..1009343

Molecular Weight (calculated)

42586.0 Da

IEP (calculated)

8.706

GRAVY (calculated)

-0.376

Length

374 amino acids

Sequence
(BLAST)

001: MKSKGGVELS GRNVLHRKWA LLLCVASFCA GMFFTNRIWS MAEYKEISRA STEIERIKLN SEGCNLNLVV RPNSNYSQVE VSNTQNVITK SRKSETVEST
101: TRKKYFMVIG INTAFSSRKR RDSVRATWMP RAEERKKLEE EKGIIIRFVI GHSSTSGGIL DKAIEAEERL HADFLRLNHI EGYLELSAKT KIYFSTAVAL
201: WDAEFYVKVD DDVHVNLATL GLTLSMHRKK PRVYIGCMKS GPVLAQKGVR YHEPEYWKFG EVGNKYFRHA TGQLYAISQD LATYISINQG MLHKYANEDV
301: SLGSWFIGLD VDHVDDRRMC CGTPPDCEWK AQAGNICVAS FDWKCSGICR SVERMKEVHQ RCGEDENALW SGTF

Best Arabidopsis Sequence Match ( AT1G11730.1 )
(BLAST)

001: MSFKNRGDYN FTPRNVVSRN SVFFMCLASF CLGMFFTNRM WNIVPEARGI SRLSKLSLSS SDCDKKNVLD YGNNTIGILD KSISNLEMKL VAARAERESL
101: SGKFNISNEA KKRKYFMVIG INTAFSSRKR RDSVRSTWMP QGENLKKLEE EKGIIVRFVI GHSVLSHGIL DKAIEAEEKT HGDFLRLEHT EGYMKLSAKT
201: KTFFATAVSL WDAEFYIKVD DDVHVNLASL KKALSAHQNK PRVYVGCMKS GPVLARKSVK YHEPEYWKFG EVGNKYFRHA TGQFYAISKD LATYILINQD
301: LLHKYANEDV SLGSWFIGLN VEHVDEKRLC CSTSQDCELK AMMGHVCAAS FDWKCSGICR SAERMADVHE RCGEPQNALW TSNS

Arabidopsis Description

B3GALT1Hexosyltransferase (Fragment) [Source:UniProtKB/TrEMBL;Acc:W8Q7D4]
SUBAcon: [mitochondrion,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.