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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: golgi

Predictor Summary:
  • nucleus 1
  • mitochondrion 3
  • golgi 3
  • plastid 1
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • cytosol 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d053825_P002 Maize golgi 97.51 97.51
Os02t0164300-02 Rice cytosol 43.53 96.15
TraesCS6D01G127200.1 Wheat golgi 88.31 88.75
TraesCS6B01G166400.1 Wheat golgi 88.31 88.75
TraesCS6A01G138100.1 Wheat golgi 88.31 88.75
HORVU6Hr1G026680.2 Barley golgi 88.06 88.5
EER88815 Sorghum golgi 79.35 79.75
GSMUA_Achr5P00690_001 Banana golgi 68.66 68.83
VIT_10s0116g01710.t01 Wine grape cytosol 68.16 67.16
EER91307 Sorghum golgi, peroxisome, plasma membrane 68.16 66.99
GSMUA_Achr9P30290_001 Banana cytosol 68.66 65.4
KRH02065 Soybean golgi, mitochondrion 59.95 64.44
KRH51094 Soybean cytosol 54.98 64.06
AT1G11730.1 Thale cress golgi, mitochondrion 57.71 60.42
CDY49800 Canola mitochondrion 58.21 59.85
Bra019835.1-P Field mustard mitochondrion 58.21 59.85
CDX97981 Canola mitochondrion 57.71 59.34
OQU85173 Sorghum golgi, nucleus 58.71 59.3
KXG35748 Sorghum golgi 57.71 58.88
KXG22053 Sorghum golgi, plastid 53.48 52.96
EES14424 Sorghum golgi, mitochondrion 50.5 52.73
EES13774 Sorghum mitochondrion 33.58 39.02
OQU87975 Sorghum cytosol 47.01 37.72
EER87954 Sorghum plastid 31.09 35.41
OQU75947 Sorghum mitochondrion 30.35 33.33
KXG19339 Sorghum golgi, mitochondrion, plastid 27.36 30.22
EES19194 Sorghum golgi, peroxisome, plastid 23.13 24.8
Protein Annotations
MapMan:21.4.1.1.5.3Gene3D:3.90.550.50EntrezGene:8076104UniProt:C5XVH3ncoils:CoilInterPro:DUF4094
EnsemblPlants:EES04570ProteinID:EES04570ProteinID:EES04570.1GO:GO:0000139GO:GO:0003674GO:GO:0003824
GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005794GO:GO:0005975
GO:GO:0006464GO:GO:0006486GO:GO:0008150GO:GO:0008152GO:GO:0008378GO:GO:0009058
GO:GO:0009987GO:GO:0016020GO:GO:0016021GO:GO:0016740GO:GO:0016757GO:GO:0019538
InterPro:Glyco_trans_31PFAM:PF01762PFAM:PF13334PANTHER:PTHR11214PANTHER:PTHR11214:SF120EnsemblPlantsGene:SORBI_3004G051300
unigene:Sbi.19973UniParc:UPI0001A85567RefSeq:XP_002451594.1SEG:seg::
Description
hypothetical protein
Coordinates
chr4:+:4153564..4157352
Molecular Weight (calculated)
45106.6 Da
IEP (calculated)
7.498
GRAVY (calculated)
-0.382
Length
402 amino acids
Sequence
(BLAST)
001: MSWRRGGGGD GGGVSRRWAV LLCVGSFCLG LLFTNRMWTL PEASEIARPN ANVEEGNVPV AGECGSKKVQ EKQDYRDILQ VQDSHHDVQT LDKTIASLET
101: ELSAARSLQE SLLNGSPVAE EFKVSESIGR RKYLMVIGIN TAFSSRKRRD SIRYTWMPQG EKRKKLEEEK GIIIRFVIGH SAISGGIVDR AIEAEDRKHG
201: DFMRIDHVEG YLALSGKTKT YFATAVSLWD ADFYVKVDDD VHVNIATLGQ ILSKQALKPR VYIGCMKSGP VLSEKGVRYY EPEHWKFGES GNKYFRHATG
301: QLYAISKDLA TYISINKHIL HKYINEDVSL GSWFIGLDVE HIDDRRLCCG TPPDCEWKAQ AGNICAASFD WRCSGICNSE GRIWEVHNKC AEGEKALWNA
401: TF
Best Arabidopsis Sequence Match ( AT1G05170.2 )
(BLAST)
001: MSAKIKGEYS SRSFVSRKWT ILLCLGSFCV GMFFTNRMWN IPESKGMSHP SVTEAERLKL VSEGCNPKAL YQKEVKRDPQ ALFGEVANTH IALQTLDKTI
101: SSLEMELAAA RSVQESLQNG APLSDDMGKK QPQEQRRFLM VVGINTAFSS RKRRDSIRAT WMPQGEKRKR LEEEKGIIIR FVIGHSATTG GILDRAIEAE
201: DRKHGDFLRL DHVEGYLELS GKTKTYFSTA FSMWDADFYV KVDDDVHVNI ATLGETLVRH RKKPRVYIGC MKSGPVLSQK GVRYHEPEYW KFGENGNKYF
301: RHATGQLYAI SRDLASYISI NQHVLHKYAN EDVSLGAWFI GIDVKHIDDR RLCCGTPPDC EWKAQAGNIC VASFDWSCSG ICRSADRIKE VHRRCGEGEK
401: ALWSATF
Arabidopsis Description
B3GALT2Hexosyltransferase (Fragment) [Source:UniProtKB/TrEMBL;Acc:W8Q3U9]
SUBAcon: [golgi,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.