CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, golgi

Predictor Summary:

plastid 4
golgi 2
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
EES14424	golgi

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G32930.1	EES14424	AT1G32930.1	24693939

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU1Hr1G010190.1	Barley	cytosol	18.44	87.65
Os08t0116900-01	Rice	golgi, mitochondrion	82.08	81.44
TraesCS7D01G313600.2	Wheat	golgi	78.44	77.84
TraesCS7A01G316500.2	Wheat	golgi, mitochondrion, plastid	78.18	73.59
Zm00001d035090_P002	Maize	mitochondrion	84.94	73.15
TraesCS7B01G217700.1	Wheat	extracellular, golgi, peroxisome	77.4	73.04
Bra023296.1-P	Field mustard	golgi	55.58	54.73
CDX93812	Canola	golgi	55.32	54.48
VIT_02s0025g02830.t01	Wine grape	golgi	56.62	53.83
AT1G32930.1	Thale cress	golgi	54.81	52.88
OQU85173	Sorghum	golgi, nucleus	52.73	51.01
EES04570	Sorghum	golgi	52.73	50.5
EER88815	Sorghum	golgi	51.95	50.0
KXG35748	Sorghum	golgi	50.13	48.98
CDY54843	Canola	golgi	55.58	48.86
KXG22053	Sorghum	golgi, plastid	51.43	48.77
EER91307	Sorghum	golgi, peroxisome, plasma membrane	50.65	47.68
EES13774	Sorghum	mitochondrion	31.43	34.97
OQU87975	Sorghum	cytosol	44.94	34.53
EER87954	Sorghum	plastid	31.17	33.99
OQU75947	Sorghum	mitochondrion	30.91	32.51
KXG19339	Sorghum	golgi, mitochondrion, plastid	28.31	29.95
EES19194	Sorghum	golgi, peroxisome, plastid	23.64	24.27

Protein Annotations

MapMan:21.4.1.1.5.3	EntrezGene:8066101	UniProt:C5YM29	InterPro:DUF4094	EnsemblPlants:EES14424	ProteinID:EES14424
ProteinID:EES14424.1	GO:GO:0000003	GO:GO:0000139	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005794	GO:GO:0005975	GO:GO:0006464
GO:GO:0006486	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0008378	GO:GO:0009058
GO:GO:0009790	GO:GO:0009791	GO:GO:0009793	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021
GO:GO:0016740	GO:GO:0016757	GO:GO:0019538	InterPro:Glyco_trans_31	PFAM:PF01762	PFAM:PF13334
PANTHER:PTHR11214	PANTHER:PTHR11214:SF123	EnsemblPlantsGene:SORBI_3007G018500	unigene:Sbi.19749	TMHMM:TMhelix	UniParc:UPI0001A87989
RefSeq:XP_002444929.1	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr7:-:1756652..1760051

Molecular Weight (calculated)

43129.3 Da

IEP (calculated)

7.463

GRAVY (calculated)

-0.389

Length

385 amino acids

Sequence
(BLAST)

001: MMAAAALRPH KASPARVPTR CVAALCAACF ILGVCVVNRY WAVPEHPGCP DKAGSDRSRA ALDQVSQTRE VVMALDKTIS DIEMRLAAAR AAQAMSQGMS
101: PGDSESDQGT ARHRMSFVMG VFTTFANRKR RDSIRQTWMP QGDQLRILEE KGVVIRFVIG RSANPNPDNE VDRAIDAEDK EYNDILRIDH VEGYGGLPMK
201: IQMFLSTALT MWDADFYVKA DDNVYVNIGI TRSLLARHRA KPRVYIGCMK SGPVIAKNDS KYYEPDHWKF GTEGNNYFRH ATRQLYAVTR DLATYISANR
301: HILHKYSNED VSFGSWLIGL EVEHVDERSL CCGTPPDCEW KAQAGNPCAA SFDWNCTGIC NPVERMTEVH RRCWEGIGAE GHTQF

Best Arabidopsis Sequence Match ( AT1G05170.2 )
(BLAST)

001: MSAKIKGEYS SRSFVSRKWT ILLCLGSFCV GMFFTNRMWN IPESKGMSHP SVTEAERLKL VSEGCNPKAL YQKEVKRDPQ ALFGEVANTH IALQTLDKTI
101: SSLEMELAAA RSVQESLQNG APLSDDMGKK QPQEQRRFLM VVGINTAFSS RKRRDSIRAT WMPQGEKRKR LEEEKGIIIR FVIGHSATTG GILDRAIEAE
201: DRKHGDFLRL DHVEGYLELS GKTKTYFSTA FSMWDADFYV KVDDDVHVNI ATLGETLVRH RKKPRVYIGC MKSGPVLSQK GVRYHEPEYW KFGENGNKYF
301: RHATGQLYAI SRDLASYISI NQHVLHKYAN EDVSLGAWFI GIDVKHIDDR RLCCGTPPDC EWKAQAGNIC VASFDWSCSG ICRSADRIKE VHRRCGEGEK
401: ALWSATF

Arabidopsis Description

B3GALT2Hexosyltransferase (Fragment) [Source:UniProtKB/TrEMBL;Acc:W8Q3U9]
SUBAcon: [golgi,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.