CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

nucleus 1
mitochondrion 2
golgi 4
extracellular 2
endoplasmic reticulum 2
vacuole 3
plasma membrane 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	mitochondrion, nucleus, secretory
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	golgi
Predotar:	secretory
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	vacuole
YLoc:	golgi

PPI

Inferred distinct locusB in Crop

locusB	locations
CDX93812	golgi
CDY54843	golgi

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G32930.1	CDX93812	AT1G32930.1	24693939
AT1G32930.1	CDY54843	AT1G32930.1	24693939

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra023296.1-P	Field mustard	golgi	99.49	99.49
AT1G32930.1	Thale cress	golgi	93.35	91.48
CDY54843	Canola	golgi	99.74	89.04
VIT_02s0025g02830.t01	Wine grape	golgi	77.24	74.57
HORVU1Hr1G010190.1	Barley	cytosol	13.81	66.67
CDX87501	Canola	golgi	58.31	59.53
CDX88390	Canola	golgi	57.8	59.16
CDX97371	Canola	cytosol, endoplasmic reticulum	60.1	58.02
CDX92791	Canola	cytosol	59.08	57.46
CDY14294	Canola	cytosol, golgi	59.59	57.39
CDX73278	Canola	vacuole	57.8	57.36
CDY67379	Canola	vacuole	57.8	57.36
CDY48266	Canola	golgi	59.85	57.21
CDY46675	Canola	cytosol	59.59	56.83
CDY49507	Canola	plastid	59.59	56.83
CDY46836	Canola	plastid	59.08	56.76
CDY12206	Canola	golgi	59.08	56.48
Os08t0116900-01	Rice	golgi, mitochondrion	55.5	55.93
CDX96559	Canola	cytosol, nucleus, peroxisome	49.87	55.87
CDY04694	Canola	golgi	52.94	55.35
EES14424	Sorghum	golgi, mitochondrion	54.48	55.32
CDY30641	Canola	golgi	52.69	55.08
TraesCS7D01G313600.2	Wheat	golgi	54.48	54.9
CDY49800	Canola	mitochondrion	54.73	54.73
CDX97981	Canola	mitochondrion	54.48	54.48
CDY38836	Canola	golgi	53.2	53.33
CDY00412	Canola	golgi	53.2	52.39
TraesCS7B01G217700.1	Wheat	extracellular, golgi, peroxisome	53.71	51.47
TraesCS7A01G316500.2	Wheat	golgi, mitochondrion, plastid	53.71	51.34
CDY68943	Canola	golgi	45.52	50.42
CDY11037	Canola	golgi, mitochondrion, plastid	46.04	50.14
CDY01303	Canola	golgi	48.08	48.7
Zm00001d035090_P002	Maize	mitochondrion	50.9	44.52
CDY49171	Canola	mitochondrion	34.02	39.7
CDX96213	Canola	mitochondrion	34.02	39.7
CDY14386	Canola	mitochondrion	33.76	38.94
CDY35642	Canola	mitochondrion	33.5	38.76
CDY58927	Canola	cytosol	32.74	37.21
CDY11534	Canola	plastid	32.74	37.1
CDX75222	Canola	plastid	32.74	36.78
CDX68818	Canola	plastid	32.74	36.68
CDY42221	Canola	cytosol	11.0	33.08
CDX75799	Canola	mitochondrion	26.6	30.41
CDX82456	Canola	mitochondrion	26.34	30.12
CDX97620	Canola	mitochondrion	26.09	29.82
CDY25866	Canola	mitochondrion	26.09	29.31
CDY35316	Canola	plastid	27.11	29.2
CDX98518	Canola	mitochondrion	26.09	29.06
CDX77030	Canola	plastid	26.85	28.93
CDY55849	Canola	mitochondrion	25.58	28.74
CDY55848	Canola	mitochondrion	25.58	28.74

Protein Annotations

MapMan:21.4.1.1.5.3	Gene3D:3.90.550.50	GO:A0A078DY23	EnsemblPlants:CDX93812	ProteinID:CDX93812	ProteinID:CDX93812.1
ncoils:Coil	InterPro:DUF4094	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005975
GO:GO:0006464	GO:GO:0006486	GO:GO:0008150	GO:GO:0008152	GO:GO:0008378	GO:GO:0009058
GO:GO:0009987	GO:GO:0016020	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00156587001	InterPro:Glyco_trans_31
PFAM:PF01762	PFAM:PF13334	PANTHER:PTHR11214	PANTHER:PTHR11214:SF123	TMHMM:TMhelix	UniPathway:UPA00378
UniParc:UPI0004EEFAD1	:	:	:	:	:

Description

BnaA09g24120D

Coordinates

chrLK031877:+:1104222..1106511

Molecular Weight (calculated)

43572.8 Da

IEP (calculated)

7.967

GRAVY (calculated)

-0.338

Length

391 amino acids

Sequence
(BLAST)

001: MGMGRHQKSG VPARWVLVLC ISSFLLGVLV INRLLATSET VDSNGRASSD QATSLHPLVD CQNKARDTLS RVSHTHDVIK TLDKTISSLE VELATARAAA
101: RSDGSPAVSK AVADQSKERP RMFFVMGIMT AFSSRKRRDS IRGTWLPKGD ELKRLETEKG IIMRFVIGHS SSPGGVLDHT IEAEEEQHKD FFRLNHIEGY
201: HELSSKTQIY FSSAVAKWDA DFYIKVDDDV HVNLGMLGST LARHRSKARV YIGCMKSGPV LAQKGVKYHE PEYWKFGEEG NKYFRHATGQ IYAVSKDLAT
301: YISVNRQLLH KYANEDVSLG SWFIGLDVEH IDDRSLCCGT PLDCEWKGQA GNPCAASFDW SCSGICKSVD RMLEVHQRCG EGQGAIWHTS F

Best Arabidopsis Sequence Match ( AT1G32930.1 )
(BLAST)

001: MGMGRYQKSA TSGVSARWVF VLCISSFLLG VLVVNRLLAS FETVDGIERA SPEQNDQSRS LNPLVDCESK EGDILSRVSH THDVIKTLDK TISSLEVELA
101: TARAARSDGR DGSPAVAKTV ADQSKIRPRM FFVMGIMTAF SSRKRRDSIR GTWLPKGDEL KRLETEKGII MRFVIGHSSS PGGVLDHTIE AEEEQHKDFF
201: RLNHIEGYHE LSSKTQIYFS SAVAKWDADF YIKVDDDVHV NLGMLGSTLA RHRSKPRVYI GCMKSGPVLA QKGVKYHEPE YWKFGEEGNK YFRHATGQIY
301: AISKDLATYI SVNRQLLHKY ANEDVSLGSW FIGLDVEHID DRSLCCGTPL DCEWKGQAGN PCAASFDWSC SGICKSVDRM LEVHQRCGEG DGAIWHSSF

Arabidopsis Description

GALT31ABeta-1,6-galactosyltransferase GALT31A [Source:UniProtKB/Swiss-Prot;Acc:Q9MAP8]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.