CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

plastid 2
extracellular 3
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	plastid, secretory
BaCelLo:	plastid
iPSORT:	secretory
MultiLoc:	golgi
Predotar:	secretory
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX87501	Canola	golgi	95.55	95.3
AT1G77810.1	Thale cress	golgi	90.84	89.66
Solyc11g013490.1.1	Tomato	golgi	75.39	72.73
PGSC0003DMT400071429	Potato	golgi	75.39	72.73
CDX96559	Canola	cytosol, nucleus, peroxisome	64.14	70.2
VIT_18s0001g04150.t01	Wine grape	golgi	72.77	70.03
KRH64756	Soybean	golgi	71.47	68.77
KRH16620	Soybean	mitochondrion	71.47	68.77
KRH18826	Soybean	endoplasmic reticulum	71.2	68.51
CDY38836	Canola	golgi	69.9	68.46
KRH53153	Soybean	vacuole	70.42	68.27
CDY04694	Canola	golgi	66.49	67.91
Zm00001d016891_P001	Maize	plasma membrane	70.42	67.59
CDY30641	Canola	golgi	65.97	67.38
OQU85173	Sorghum	golgi, nucleus	70.16	67.34
CDY00412	Canola	golgi	69.37	66.75
GSMUA_Achr5P23050_001	Banana	cytosol, golgi, mitochondrion, plastid	69.11	66.0
Os02t0566800-01	Rice	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole	67.02	65.81
TraesCS6A01G201400.2	Wheat	golgi	67.54	64.99
TraesCS6D01G187900.1	Wheat	golgi	67.54	64.99
TraesCS6B01G227300.1	Wheat	golgi	67.28	64.74
CDY01303	Canola	golgi	64.66	63.99
Os09t0452900-01	Rice	golgi	64.92	63.1
TraesCS5B01G233700.1	Wheat	golgi	64.66	62.53
TraesCS5D01G242400.1	Wheat	golgi	64.4	62.28
KXG35748	Sorghum	golgi	63.87	61.93
GSMUA_Achr8P23200_001	Banana	golgi	69.11	61.83
Zm00001d000099_P003	Maize	golgi	67.54	61.14
Zm00001d020692_P002	Maize	golgi, mitochondrion	62.83	57.97
CDX93812	Canola	golgi	59.16	57.8
TraesCS5A01G235300.4	Wheat	golgi	64.14	57.65
CDX73278	Canola	vacuole	58.64	56.85
CDY67379	Canola	vacuole	58.64	56.85
CDX97981	Canola	mitochondrion	57.33	56.01
HORVU6Hr1G052140.8	Barley	plastid	68.85	55.84
CDY46836	Canola	plastid	59.42	55.77
CDY49800	Canola	mitochondrion	57.07	55.75
CDY49507	Canola	plastid	59.69	55.61
CDY48266	Canola	golgi	58.64	54.77
CDX97371	Canola	cytosol, endoplasmic reticulum	57.59	54.32
CDY12206	Canola	golgi	57.85	54.03
CDY14294	Canola	cytosol, golgi	56.81	53.45
CDX92791	Canola	cytosol	56.02	53.23
CDY46675	Canola	cytosol	56.54	52.68
CDY54843	Canola	golgi	59.42	51.83
HORVU5Hr1G067750.1	Barley	plastid	64.14	50.52
CDY68943	Canola	golgi	43.46	47.03
CDY11037	Canola	golgi, mitochondrion, plastid	43.72	46.52
CDX96213	Canola	mitochondrion	32.98	37.61
CDY14386	Canola	mitochondrion	33.25	37.46
CDY49171	Canola	mitochondrion	32.72	37.31
CDY35642	Canola	mitochondrion	32.98	37.28
CDY58927	Canola	cytosol	32.98	36.63
CDY11534	Canola	plastid	32.46	35.94
CDX75222	Canola	plastid	30.89	33.91
CDX68818	Canola	plastid	30.89	33.81
CDY42221	Canola	cytosol	10.73	31.54
CDX97620	Canola	mitochondrion	28.01	31.29
CDX75799	Canola	mitochondrion	27.75	30.99
CDX98518	Canola	mitochondrion	28.27	30.77
CDX82456	Canola	mitochondrion	27.49	30.7
CDY25866	Canola	mitochondrion	27.23	29.89
CDY55849	Canola	mitochondrion	26.96	29.6
CDY55848	Canola	mitochondrion	26.96	29.6
CDY35316	Canola	plastid	25.92	27.27
CDX77030	Canola	plastid	25.65	27.0

Protein Annotations

MapMan:21.4.1.1.5.3	Gene3D:3.90.550.50	GO:A0A078DGN1	EnsemblPlants:CDX88390	ProteinID:CDX88390	ProteinID:CDX88390.1
InterPro:DUF4094	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005975	GO:GO:0006464
GO:GO:0006486	GO:GO:0008150	GO:GO:0008152	GO:GO:0008378	GO:GO:0009058	GO:GO:0009987
GO:GO:0016020	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00147917001	InterPro:Glyco_trans_31	PFAM:PF01762
PFAM:PF13334	PANTHER:PTHR11214	PANTHER:PTHR11214:SF74	TMHMM:TMhelix	UniPathway:UPA00378	UniParc:UPI0004EC2578
SEG:seg	:	:	:	:	:

Description

BnaC06g38340D

Coordinates

chrLK031855:-:715223..717527

Molecular Weight (calculated)

43368.6 Da

IEP (calculated)

7.780

GRAVY (calculated)

-0.417

Length

382 amino acids

Sequence
(BLAST)

001: MKHKVSRRVI SLRWVPFICI SFFVLGAIFT SRSWEPSSDS GSQLISQRHR DHELQIVSDD CAHKKKATQE KDVIDQVLRT HQEIDVARSL DNSVDGSETL
101: SSSSTGSNPK KKVFMVMGIN TAFSSRKRRD SLRGTWMPQG EKLEKLEKEK GIVIKFMIGH SATSNSILDR AIDSEDAQHK DFLRLEHVEG YHELSAKTKI
201: FFSTAVARWD AEFYIKVDDD VHVNLGMLAS TLARHRSKPR VYIGCMKSGP VLAQKTVKYH EPEYWKFGEE GNKYFRHATG QIYAISKDLA KYISVNQPIL
301: HKYANEDVSL GSWFIGLEVE HIDDRNFCCG TPPDCRWKAE AGDVCVASFE WSCSGICKSV ERMKIVHEVC SEGEDAVWNA LL

Best Arabidopsis Sequence Match ( AT1G77810.1 )
(BLAST)

001: MKHKVSKRVI SLKWVPFLCI SFFALGAIFT SRSWEPSSDS GSQLISQHHR DHELQIVSDD CAHNKKATQE KDVTGEVLRT HEAIQDDRSL DKSVSTLSST
101: RSSQEMVDGS ETNPRKKVFM VMGINTAFSS RKRRDSVRET WMPQGEKLER LEQEKGIVIK FMIGHSATSN SILDRAIDSE DAQHKDFLRL EHVEGYHELS
201: AKTKIFFSTA VAKWDAEFYI KVDDDVHVNL GMLASTLARH RSKPRVYIGC MKSGPVLAQK TVKYHEPEYW KFGEDGNKYF RHATGQIYAI SKDLANYISI
301: NQPILHKYAN EDVSLGSWFI GLEVEHIDDR NFCCGTPPDC RWKAEAGDVC VASFEWSCSG ICKSVERMKI VHEVCSEGEG AVWNTLL

Arabidopsis Description

Hexosyltransferase [Source:UniProtKB/TrEMBL;Acc:A0A178WEM8]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.