CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

nucleus 1
mitochondrion 2
golgi 4
extracellular 2
endoplasmic reticulum 2
vacuole 3
plasma membrane 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	mitochondrion, nucleus, secretory
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	golgi
Predotar:	secretory
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	vacuole
YLoc:	golgi

PPI

Inferred distinct locusB in Crop

locusB	locations
CDX93812	golgi
CDY54843	golgi

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G32930.1	CDX93812	AT1G32930.1	24693939
AT1G32930.1	CDY54843	AT1G32930.1	24693939

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra023296.1-P	Field mustard	golgi	89.04	99.74
CDX93812	Canola	golgi	89.04	99.74
AT1G32930.1	Thale cress	golgi	83.56	91.73
VIT_02s0025g02830.t01	Wine grape	golgi	69.18	74.81
HORVU1Hr1G010190.1	Barley	cytosol	12.33	66.67
CDX87501	Canola	golgi	52.28	59.79
CDX88390	Canola	golgi	51.83	59.42
CDX97371	Canola	cytosol, endoplasmic reticulum	53.88	58.27
CDX92791	Canola	cytosol	52.97	57.71
CDY14294	Canola	cytosol, golgi	53.42	57.64
CDX73278	Canola	vacuole	51.83	57.61
CDY67379	Canola	vacuole	51.83	57.61
CDY48266	Canola	golgi	53.65	57.46
CDY46675	Canola	cytosol	53.42	57.07
CDY49507	Canola	plastid	53.42	57.07
CDY46836	Canola	plastid	52.97	57.0
CDY12206	Canola	golgi	52.97	56.72
Os08t0116900-01	Rice	golgi, mitochondrion	49.77	56.19
CDX96559	Canola	cytosol, nucleus, peroxisome	44.75	56.16
CDY04694	Canola	golgi	47.49	55.62
EES14424	Sorghum	golgi, mitochondrion	48.86	55.58
CDY30641	Canola	golgi	47.26	55.35
CDY49800	Canola	mitochondrion	49.32	55.24
TraesCS7D01G313600.2	Wheat	golgi	48.86	55.15
CDX97981	Canola	mitochondrion	49.09	54.99
CDY38836	Canola	golgi	47.72	53.59
CDY00412	Canola	golgi	47.72	52.64
TraesCS7B01G217700.1	Wheat	extracellular, golgi, peroxisome	48.17	51.72
TraesCS7A01G316500.2	Wheat	golgi, mitochondrion, plastid	48.17	51.59
CDY68943	Canola	golgi	40.87	50.71
CDY11037	Canola	golgi, mitochondrion, plastid	41.32	50.42
CDY01303	Canola	golgi	43.15	48.96
Zm00001d035090_P002	Maize	mitochondrion	45.66	44.74
CDY49171	Canola	mitochondrion	30.59	40.0
CDX96213	Canola	mitochondrion	30.59	40.0
CDY14386	Canola	mitochondrion	30.37	39.23
CDY35642	Canola	mitochondrion	30.14	39.05
CDY58927	Canola	cytosol	29.22	37.21
CDY11534	Canola	plastid	29.22	37.1
CDX75222	Canola	plastid	29.22	36.78
CDX68818	Canola	plastid	29.22	36.68
CDY42221	Canola	cytosol	9.82	33.08
CDX75799	Canola	mitochondrion	23.74	30.41
CDX82456	Canola	mitochondrion	23.52	30.12
CDX97620	Canola	mitochondrion	23.29	29.82
CDY25866	Canola	mitochondrion	23.29	29.31
CDY35316	Canola	plastid	24.2	29.2
CDX98518	Canola	mitochondrion	23.29	29.06
CDX77030	Canola	plastid	23.97	28.93
CDY55849	Canola	mitochondrion	22.83	28.74
CDY55848	Canola	mitochondrion	22.83	28.74

Protein Annotations

MapMan:21.4.1.1.5.3	Gene3D:3.90.550.50	GO:A0A078IZG7	UniProt:A0A078IZG7	EnsemblPlants:CDY54843	ProteinID:CDY54843
ProteinID:CDY54843.1	ncoils:Coil	InterPro:DUF4094	GO:GO:0000139	GO:GO:0003674	GO:GO:0003824
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005794	GO:GO:0005975
GO:GO:0006464	GO:GO:0006486	GO:GO:0008150	GO:GO:0008152	GO:GO:0008378	GO:GO:0009058
GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016740	GO:GO:0016757	GO:GO:0019538
EnsemblPlantsGene:GSBRNA2T00014753001	InterPro:Glyco_trans_31	PFAM:PF01762	PFAM:PF13334	PANTHER:PTHR11214	PANTHER:PTHR11214:SF123
TMHMM:TMhelix	UniPathway:UPA00378	UniParc:UPI0004EE3E40	:	:	:

Description

BnaC05g51320DHexosyltransferase [Source:UniProtKB/TrEMBL;Acc:A0A078IZG7]

Coordinates

chrLK033355:+:38273..45595

Molecular Weight (calculated)

48668.7 Da

IEP (calculated)

7.787

GRAVY (calculated)

-0.359

Length

438 amino acids

Sequence
(BLAST)

001: MGMGRHQKSG VPARWVLVLC ISSFLLGVLV INRLLATSET VDSNGRASSD QATSLHPLVD CQNKARDTLS RVSHTHDVIK LLATSETVDS NGRASSDQAT
101: SLHPLVDCQN KARDILSRVS HTHDVIKTLD KTISSLEVEL ATARAAARSD GSPAVSKAVA DQSKERPRMF FVMGIMTAFS SRKRRDSIRG TWLPKGDELK
201: RLETEKGIIM RFVIGHSSSP GGVLDHTIEA EEEQHKDFFR LNHIEGYHEL SSKTQIYFSS AVAKWDADFY IKVDDDVHVN LGMLGSTLAR HRSKPRVYIG
301: CMKSGPVLAQ KGVKYHEPEY WKFGEEGNKY FRHATGQIYA VSKDLATYIS VNRQLLHKYA NEDVSLGSWF IGLDVEHIDD RSLCCGTPLD CEWKGQAGNP
401: CAASFDWSCS GICKSVDRML EVHQRCGEGQ GAIWHTSF

Best Arabidopsis Sequence Match ( AT1G32930.1 )
(BLAST)

001: MGMGRYQKSA TSGVSARWVF VLCISSFLLG VLVVNRLLAS FETVDGIERA SPEQNDQSRS LNPLVDCESK EGDILSRVSH THDVIKTLDK TISSLEVELA
101: TARAARSDGR DGSPAVAKTV ADQSKIRPRM FFVMGIMTAF SSRKRRDSIR GTWLPKGDEL KRLETEKGII MRFVIGHSSS PGGVLDHTIE AEEEQHKDFF
201: RLNHIEGYHE LSSKTQIYFS SAVAKWDADF YIKVDDDVHV NLGMLGSTLA RHRSKPRVYI GCMKSGPVLA QKGVKYHEPE YWKFGEEGNK YFRHATGQIY
301: AISKDLATYI SVNRQLLHKY ANEDVSLGSW FIGLDVEHID DRSLCCGTPL DCEWKGQAGN PCAASFDWSC SGICKSVDRM LEVHQRCGEG DGAIWHSSF

Arabidopsis Description

GALT31ABeta-1,6-galactosyltransferase GALT31A [Source:UniProtKB/Swiss-Prot;Acc:Q9MAP8]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.