CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

plastid 1
mitochondrion 1
golgi 4
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	plastid, secretory
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	golgi
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY48266	Canola	golgi	98.29	98.29
AT2G32430.1	Thale cress	golgi	91.69	91.69
CDY49507	Canola	plastid	87.04	86.83
CDY46836	Canola	plastid	85.82	86.24
VIT_12s0059g00640.t01	Wine grape	golgi	78.24	78.62
PGSC0003DMT400074517	Potato	cytosol, golgi, mitochondrion, vacuole	77.26	77.45
Solyc07g052320.2.1	Tomato	mitochondrion, plastid	77.02	77.21
KRH26781	Soybean	golgi, plasma membrane	76.28	76.66
KRH22570	Soybean	golgi	76.04	76.41
KRH56140	Soybean	golgi, mitochondrion	75.55	75.92
KRH25371	Soybean	golgi, mitochondrion	74.57	75.12
Solyc12g005880.1.1	Tomato	plastid	71.15	73.67
PGSC0003DMT400022537	Potato	plastid	70.9	73.05
GSMUA_Achr4P33450_001	Banana	golgi	71.39	72.46
GSMUA_Achr7P00260_001	Banana	golgi	71.88	72.41
Os03t0577500-01	Rice	golgi, peroxisome, plastid	71.39	71.92
CDX97371	Canola	cytosol, endoplasmic reticulum	70.9	71.6
CDX92791	Canola	cytosol	70.17	71.39
CDY46675	Canola	cytosol	71.15	70.98
CDY14294	Canola	cytosol, golgi	70.42	70.94
EER91307	Sorghum	golgi, peroxisome, plasma membrane	70.66	70.66
TraesCS7B01G241500.2	Wheat	cytosol, golgi, mitochondrion, nucleus	68.7	70.25
TraesCS7D01G339200.1	Wheat	cytosol, golgi, mitochondrion, plastid	68.7	70.25
GSMUA_Achr4P23710_001	Banana	golgi	70.9	70.22
HORVU7Hr1G081720.2	Barley	cytosol	68.46	70.18
TraesCS7A01G330900.1	Wheat	cytosol, golgi, mitochondrion, plastid	67.97	69.5
Zm00001d013804_P003	Maize	golgi, plastid, vacuole	70.17	68.99
CDY68943	Canola	golgi	55.75	64.59
CDY11037	Canola	golgi, mitochondrion, plastid	56.48	64.35
CDX97981	Canola	mitochondrion	57.95	60.61
CDY49800	Canola	mitochondrion	57.95	60.61
CDX93812	Canola	golgi	56.48	59.08
CDX88390	Canola	golgi	54.03	57.85
CDX87501	Canola	golgi	54.03	57.7
CDX96559	Canola	cytosol, nucleus, peroxisome	48.17	56.45
CDY04694	Canola	golgi	51.59	56.42
CDY30641	Canola	golgi	50.86	55.62
CDX73278	Canola	vacuole	53.55	55.58
CDY67379	Canola	vacuole	53.55	55.58
CDY38836	Canola	golgi	50.86	53.33
CDY54843	Canola	golgi	56.72	52.97
CDY00412	Canola	golgi	50.86	52.39
CDY01303	Canola	golgi	46.94	49.74
CDX96213	Canola	mitochondrion	34.96	42.69
CDY49171	Canola	mitochondrion	34.72	42.39
CDY35642	Canola	mitochondrion	34.47	41.72
CDY14386	Canola	mitochondrion	34.47	41.59
CDY11534	Canola	plastid	31.78	37.68
CDY58927	Canola	cytosol	31.54	37.5
CDX75222	Canola	plastid	31.54	37.07
CDX68818	Canola	plastid	31.54	36.96
CDY42221	Canola	cytosol	10.02	31.54
CDX97620	Canola	mitochondrion	24.94	29.82
CDX82456	Canola	mitochondrion	24.45	29.24
CDX75799	Canola	mitochondrion	24.45	29.24
CDY35316	Canola	plastid	25.92	29.2
CDX98518	Canola	mitochondrion	24.94	29.06
CDY25866	Canola	mitochondrion	24.69	29.02
CDY55848	Canola	mitochondrion	24.69	29.02
CDY55849	Canola	mitochondrion	24.69	29.02
CDX77030	Canola	plastid	25.67	28.93

Protein Annotations

MapMan:21.4.1.1.5.3	Gene3D:3.90.550.50	GO:A0A078FG40	UniProt:A0A078FG40	EnsemblPlants:CDY12206	ProteinID:CDY12206
ProteinID:CDY12206.1	ncoils:Coil	InterPro:DUF4094	GO:GO:0000139	GO:GO:0003674	GO:GO:0003824
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005794	GO:GO:0005975
GO:GO:0006464	GO:GO:0006486	GO:GO:0008150	GO:GO:0008152	GO:GO:0008378	GO:GO:0009058
GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016740	GO:GO:0016757	GO:GO:0019538
EnsemblPlantsGene:GSBRNA2T00061225001	InterPro:Glyco_trans_31	PFAM:PF01762	PFAM:PF13334	PANTHER:PTHR11214	PANTHER:PTHR11214:SF208
TMHMM:TMhelix	UniPathway:UPA00378	UniParc:UPI0004EE04D0	SEG:seg	:	:

Description

BnaC04g12360DHexosyltransferase [Source:UniProtKB/TrEMBL;Acc:A0A078FG40]

Coordinates

chrLK032018:-:407365..410473

Molecular Weight (calculated)

46582.7 Da

IEP (calculated)

9.169

GRAVY (calculated)

-0.481

Length

409 amino acids

Sequence
(BLAST)

001: MSPKIKGENL YSRSFVSRKW TFLLCFASFC FGIFFTDRMW NIPESNDMAR PSVTEAERLK LISEGCGPKT LYQKEVKRDP QALFGEVSKT HNAIQTLDKT
101: ISSLEMELAA AKSAQESLTN GAPVSNDVEK NQLLGKKRRY LMVVGINTAF SSRKRRDSIR TTWMPQGEKR KKLEEEKGII IRFVIGHSAT AGGILDRSIE
201: AEDKKHGDFM RLDHVEGYLE LSGKTKKYFS TAFSMWDADF YVKVDDDVHV NIATLGETLV RHRKKPRVYI GCMKSGPVLS QKGVRYHEPE YWKFGENGNK
301: YFRHATGQLY AISRDLASYV SINQHVLHKY ANEDVTLGAW FIGLDVTHID DRRLCCGTPP DCEWKAQAGN ICVASFDWTC SGICRSADRI KEVHRRCGEP
401: EKAIWKATF

Best Arabidopsis Sequence Match ( AT2G32430.1 )
(BLAST)

001: MSTKIKGELF PSRSLVSKKW TFLLCFGSFC FGILFTDRMW IIPESKDMPR PSVSTEAERL KLISEGCDPK TLYQKEVNRD PQALFGEVSK THNAIQTLDK
101: TISSLEMELA AARSAQESLV NGAPISNDME KKQLPGKRRY LMVVGINTAF SSRKRRDSVR TTWMPSGEKR KKLEEEKGII IRFVIGHSAT AGGILDRSIE
201: AEDKKHGDFL RLDHVEGYLE LSGKTKTYFS TAVSKWDAEF YVKVDDDVHV NIATLGETLV RHRKKHRVYL GCMKSGPVLS QKGVRYHEPE YWKFGENGNK
301: YFRHATGQLY AISRDLASYI SLNQHVLHKY ANEDVTLGAW FIGLDVTHID DRRLCCGTPP DCEWKAQAGN ICVASFDWTC SGICRSADRI KEVHKRCGEP
401: ENAIWKARF

Arabidopsis Description

B3GALT3Probable beta-1,3-galactosyltransferase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZV71]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.