Factsheet for VIT_12s0059g00640.t01

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

plastid 2
mitochondrion 3
golgi 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	golgi
Plant-mPloc:	plastid
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_19s0090g00560.t01	Wine grape	cytosol, golgi	85.75	86.17
KRH26781	Soybean	golgi, plasma membrane	83.78	83.78
KRH22570	Soybean	golgi	83.54	83.54
KRH56140	Soybean	golgi, mitochondrion	83.29	83.29
KRH25371	Soybean	golgi, mitochondrion	82.06	82.27
PGSC0003DMT400074517	Potato	cytosol, golgi, mitochondrion, vacuole	80.59	80.39
AT1G05170.2	Thale cress	cytosol, golgi	80.34	80.34
Solyc07g052320.2.1	Tomato	mitochondrion, plastid	80.34	80.15
Solyc12g005880.1.1	Tomato	plastid	77.64	80.0
AT2G32430.1	Thale cress	golgi	80.1	79.71
PGSC0003DMT400022537	Potato	plastid	77.4	79.35
CDY48266	Canola	golgi	79.61	79.22
Bra005595.1-P	Field mustard	golgi	79.61	79.22
CDY49507	Canola	plastid	79.36	78.78
CDY46836	Canola	plastid	78.38	78.38
CDY12206	Canola	golgi	78.62	78.24
VIT_10s0116g01710.t01	Wine grape	cytosol	77.64	77.45
GSMUA_Achr4P33450_001	Banana	golgi	76.66	77.42
GSMUA_Achr4P23710_001	Banana	golgi	78.13	77.0
GSMUA_Achr7P00260_001	Banana	golgi	75.43	75.62
Os03t0577500-01	Rice	golgi, peroxisome, plastid	74.69	74.88
EER91307	Sorghum	golgi, peroxisome, plasma membrane	75.18	74.82
HORVU7Hr1G081720.2	Barley	cytosol	72.24	73.68
TraesCS7D01G339200.1	Wheat	cytosol, golgi, mitochondrion, plastid	71.99	73.25
TraesCS7B01G241500.2	Wheat	cytosol, golgi, mitochondrion, nucleus	71.99	73.25
TraesCS7A01G330900.1	Wheat	cytosol, golgi, mitochondrion, plastid	71.99	73.25
Bra015395.1-P	Field mustard	plastid	76.66	73.24
Zm00001d013804_P003	Maize	golgi, plastid, vacuole	73.46	71.88
VIT_18s0001g04150.t01	Wine grape	golgi	65.6	67.25
VIT_07s0031g03090.t01	Wine grape	golgi	63.88	65.49
VIT_18s0089g01040.t01	Wine grape	endoplasmic reticulum, golgi	59.71	62.15
VIT_02s0025g02830.t01	Wine grape	golgi	61.43	61.73
VIT_02s0025g01010.t01	Wine grape	mitochondrion	35.87	42.82
VIT_16s0050g02460.t01	Wine grape	mitochondrion	34.4	40.94
VIT_04s0008g06480.t01	Wine grape	golgi	32.43	38.94
VIT_19s0014g01490.t01	Wine grape	golgi, mitochondrion, plastid	26.04	30.46
VIT_13s0158g00110.t01	Wine grape	cytosol	6.63	29.35
VIT_04s0008g01270.t01	Wine grape	plastid	24.57	27.7

Protein Annotations

EntrezGene:100263657	wikigene:100263657	MapMan:21.4.1.1.5.3	Gene3D:3.90.550.50	ProteinID:CBI28801	ProteinID:CBI28801.3
ncoils:Coil	UniProt:D7TE78	InterPro:DUF4094	EMBL:FN595765	GO:GO:0000139	GO:GO:0003674
GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005794
GO:GO:0005975	GO:GO:0006464	GO:GO:0006486	GO:GO:0008150	GO:GO:0008152	GO:GO:0008378
GO:GO:0009058	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016740	GO:GO:0016757
GO:GO:0019538	InterPro:Glyco_trans_31	EntrezGene:LOC100263657	wikigene:LOC100263657	PFAM:PF01762	PFAM:PF13334
PANTHER:PTHR11214	PANTHER:PTHR11214:SF5	TIGR:TC60189	TIGR:TC65516	TMHMM:TMhelix	UniParc:UPI00015CA9FB
ArrayExpress:VIT_12s0059g00640	EnsemblPlantsGene:VIT_12s0059g00640	EnsemblPlants:VIT_12s0059g00640.t01	unigene:Vvi.12933	RefSeq:XP_002268282	RefSeq:XP_002268282.1
SEG:seg	:	:	:	:	:

Description

Hexosyltransferase [Source:UniProtKB/TrEMBL;Acc:D7TE78]

Coordinates

chr12:+:5480589..5485615

Molecular Weight (calculated)

45894.0 Da

IEP (calculated)

8.755

GRAVY (calculated)

-0.405

Length

407 amino acids

Sequence
(BLAST)

001: MSLKSRGELP SRSVISQKWT LLLCVGCFCA GMFFTNRMWA VPESKGITRT TAVEAEKLKL VSEGCDPKTL QQKFVKRDSK DIIGEVHKTH HAIQTLDKTI
101: SNLEMELAAA RAAQESMVNG SPISEDLQKT ESSGRKRYLM VVGINTAFSS RKRRDSVRAT WMPQGEKRKK LEEEKGIIIR FVIGHSATSG GILDRAIEAE
201: DKKHGDFLRL EHVEGYLELS AKTKIYFATA VALWDAEFYI KVDDDVHVNI ATLGETLVRH RKKPRVYIGC MKSGPVLAQK GVRYHEPEYW KFGEAGNKYF
301: RHATGQLYAI SKDLARYISI NQHVLHKYAN EDVSLGSWFI GLDAEHIDDR RLCCGTPPDC EWKAQAGNAC VASFDWSCSG ICRSSERIKE VHRRCGEGEN
401: ALWNAVF

Best Arabidopsis Sequence Match ( AT1G05170.2 )
(BLAST)

001: MSAKIKGEYS SRSFVSRKWT ILLCLGSFCV GMFFTNRMWN IPESKGMSHP SVTEAERLKL VSEGCNPKAL YQKEVKRDPQ ALFGEVANTH IALQTLDKTI
101: SSLEMELAAA RSVQESLQNG APLSDDMGKK QPQEQRRFLM VVGINTAFSS RKRRDSIRAT WMPQGEKRKR LEEEKGIIIR FVIGHSATTG GILDRAIEAE
201: DRKHGDFLRL DHVEGYLELS GKTKTYFSTA FSMWDADFYV KVDDDVHVNI ATLGETLVRH RKKPRVYIGC MKSGPVLSQK GVRYHEPEYW KFGENGNKYF
301: RHATGQLYAI SRDLASYISI NQHVLHKYAN EDVSLGAWFI GIDVKHIDDR RLCCGTPPDC EWKAQAGNIC VASFDWSCSG ICRSADRIKE VHRRCGEGEK
401: ALWSATF

Arabidopsis Description

B3GALT2Hexosyltransferase (Fragment) [Source:UniProtKB/TrEMBL;Acc:W8Q3U9]
SUBAcon: [golgi,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.