Factsheet for VIT_19s0090g00560.t01

Subcellular Localization

min:

: max

Winner_takes_all: golgi, cytosol

Predictor Summary:

nucleus 1
mitochondrion 2
golgi 2
plastid 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, golgi
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	golgi
Plant-mPloc:	plastid
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
VIT_01s0011g06410.t01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G26940.1	VIT_01s0011g06410.t01	AT2G01950.1	19000166

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_12s0059g00640.t01	Wine grape	golgi	86.17	85.75
Solyc07g064670.2.1	Tomato	nucleus	82.96	82.35
PGSC0003DMT400057471	Potato	golgi	82.96	82.35
PGSC0003DMT400071658	Potato	golgi	78.02	81.03
GSMUA_Achr4P33450_001	Banana	golgi	79.75	80.15
GSMUA_Achr4P23710_001	Banana	golgi	80.74	79.18
VIT_10s0116g01710.t01	Wine grape	cytosol	79.01	78.43
GSMUA_Achr7P00260_001	Banana	golgi	77.78	77.59
CDX97371	Canola	cytosol, endoplasmic reticulum	75.8	75.8
AT4G26940.1	Thale cress	endoplasmic reticulum, golgi	75.8	75.43
Bra010422.1-P	Field mustard	cytosol, golgi	75.31	75.12
CDY14294	Canola	cytosol, golgi	75.31	75.12
EER91307	Sorghum	golgi, peroxisome, plasma membrane	74.81	74.08
Os03t0577500-01	Rice	golgi, peroxisome, plastid	73.83	73.65
CDX92791	Canola	cytosol	73.09	73.63
TraesCS7B01G241500.2	Wheat	cytosol, golgi, mitochondrion, nucleus	72.35	73.25
TraesCS7D01G339200.1	Wheat	cytosol, golgi, mitochondrion, plastid	72.35	73.25
HORVU7Hr1G081720.2	Barley	cytosol	72.1	73.18
CDY46675	Canola	cytosol	74.07	73.17
TraesCS7A01G330900.1	Wheat	cytosol, golgi, mitochondrion, plastid	71.6	72.5
Bra019081.1-P	Field mustard	cytosol	68.64	72.02
Zm00001d013804_P003	Maize	golgi, plastid, vacuole	72.35	70.43
VIT_18s0001g04150.t01	Wine grape	golgi	66.67	68.01
CDY68943	Canola	golgi	58.27	66.86
CDY11037	Canola	golgi, mitochondrion, plastid	59.01	66.57
VIT_07s0031g03090.t01	Wine grape	golgi	65.19	66.5
VIT_18s0089g01040.t01	Wine grape	endoplasmic reticulum, golgi	60.99	63.17
VIT_02s0025g02830.t01	Wine grape	golgi	62.96	62.96
VIT_02s0025g01010.t01	Wine grape	mitochondrion	36.54	43.4
VIT_16s0050g02460.t01	Wine grape	mitochondrion	35.06	41.52
VIT_04s0008g06480.t01	Wine grape	golgi	33.09	39.53
VIT_13s0158g00110.t01	Wine grape	cytosol	7.65	33.7
VIT_19s0014g01490.t01	Wine grape	golgi, mitochondrion, plastid	26.67	31.03
VIT_04s0008g01270.t01	Wine grape	plastid	25.68	28.81

Protein Annotations

EntrezGene:100264061	wikigene:100264061	MapMan:21.4.1.1.5.3	Gene3D:3.90.550.50	EMBL:AM457037	ProteinID:CAN63417
ProteinID:CAN63417.1	ProteinID:CBI26647	ProteinID:CBI26647.3	ncoils:Coil	UniProt:D7T7Y8	InterPro:DUF4094
EMBL:FN595751	GO:GO:0000139	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005794	GO:GO:0005975	GO:GO:0006464	GO:GO:0006486
GO:GO:0008150	GO:GO:0008152	GO:GO:0008378	GO:GO:0009058	GO:GO:0009987	GO:GO:0016020
GO:GO:0016021	GO:GO:0016740	GO:GO:0016757	GO:GO:0019538	InterPro:Glyco_trans_31	EntrezGene:LOC100264061
wikigene:LOC100264061	PFAM:PF01762	PFAM:PF13334	PANTHER:PTHR11214	PANTHER:PTHR11214:SF5	TIGR:TC54214
TMHMM:TMhelix	UniParc:UPI0001BE2BD9	ArrayExpress:VIT_19s0090g00560	EnsemblPlantsGene:VIT_19s0090g00560	EnsemblPlants:VIT_19s0090g00560.t01	RefSeq:XP_002279814
RefSeq:XP_002279814.2	RefSeq:XP_002279828	RefSeq:XP_002279828.2	:	:	:

Description

Hexosyltransferase [Source:UniProtKB/TrEMBL;Acc:D7T7Y8]

Coordinates

chr19:+:6671523..6678496

Molecular Weight (calculated)

45602.4 Da

IEP (calculated)

8.414

GRAVY (calculated)

-0.403

Length

405 amino acids

Sequence
(BLAST)

001: MSWKSRGIEP SSKSVVSRKW TLLFCIGCFC AGMLFSDRMW TMPEAKGISR TTRTEDEELK LVSEGCAPTT KDVKHKSKDI LGEVSRTHYA IQTLDKTISN
101: LEMELAAARA AQESILNGSP ITEDLPITKS SGRRKYLMVI GINTAFSSRK RRDSVRATWM PQGDKRKKLE EEKGIIVRFV IGHSATSGGI LDRAIEAEDR
201: RHGDFLRLEH VEGYLELSAK TKAYFATAVA MWDADFYVKV DDDVHVNIAT LGATLARHRS KPRIYIGCMK SGPVLAQKGV RYHEPEYWKF GEEGNKYFRH
301: ATGQLYAISK DLATYISINQ HVLHKYANED VSLGSWFIGL DAEHIDDRRL CCGTPPDCEW KAQAGNICVA SFDWSCSGIC RSSERIREVH RRCGEGENAV
401: WSAVF

Best Arabidopsis Sequence Match ( AT1G05170.2 )
(BLAST)

001: MSAKIKGEYS SRSFVSRKWT ILLCLGSFCV GMFFTNRMWN IPESKGMSHP SVTEAERLKL VSEGCNPKAL YQKEVKRDPQ ALFGEVANTH IALQTLDKTI
101: SSLEMELAAA RSVQESLQNG APLSDDMGKK QPQEQRRFLM VVGINTAFSS RKRRDSIRAT WMPQGEKRKR LEEEKGIIIR FVIGHSATTG GILDRAIEAE
201: DRKHGDFLRL DHVEGYLELS GKTKTYFSTA FSMWDADFYV KVDDDVHVNI ATLGETLVRH RKKPRVYIGC MKSGPVLSQK GVRYHEPEYW KFGENGNKYF
301: RHATGQLYAI SRDLASYISI NQHVLHKYAN EDVSLGAWFI GIDVKHIDDR RLCCGTPPDC EWKAQAGNIC VASFDWSCSG ICRSADRIKE VHRRCGEGEK
401: ALWSATF

Arabidopsis Description

B3GALT2Hexosyltransferase (Fragment) [Source:UniProtKB/TrEMBL;Acc:W8Q3U9]
SUBAcon: [golgi,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.