Factsheet for Bra010422.1-P

Subcellular Localization

min:

: max

Winner_takes_all: golgi, cytosol

Predictor Summary:

nucleus 1
plastid 2
mitochondrion 2
golgi 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, golgi
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	golgi
Plant-mPloc:	plastid
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra024839.1-P
Bra024840.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G26940.1	Bra024839.1-P	AT2G01950.1	19000166
AT4G26940.1	Bra024840.1-P	AT2G01950.1	19000166

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY14294	Canola	cytosol, golgi	100.0	100.0
AT4G26940.1	Thale cress	endoplasmic reticulum, golgi	92.36	92.14
Bra019081.1-P	Field mustard	cytosol	84.98	89.38
VIT_19s0090g00560.t01	Wine grape	cytosol, golgi	75.12	75.31
Solyc07g064670.2.1	Tomato	nucleus	73.89	73.53
PGSC0003DMT400057471	Potato	golgi	73.89	73.53
PGSC0003DMT400071658	Potato	golgi	68.47	71.28
GSMUA_Achr4P33450_001	Banana	golgi	70.44	70.97
GSMUA_Achr4P23710_001	Banana	golgi	72.17	70.94
Bra005595.1-P	Field mustard	golgi	71.43	70.9
GSMUA_Achr7P00260_001	Banana	golgi	70.44	70.44
Os03t0577500-01	Rice	golgi, peroxisome, plastid	67.98	67.98
EER91307	Sorghum	golgi, peroxisome, plasma membrane	68.47	67.97
HORVU7Hr1G081720.2	Barley	cytosol	66.26	67.42
TraesCS7D01G339200.1	Wheat	cytosol, golgi, mitochondrion, plastid	66.26	67.25
TraesCS7A01G330900.1	Wheat	cytosol, golgi, mitochondrion, plastid	66.26	67.25
TraesCS7B01G241500.2	Wheat	cytosol, golgi, mitochondrion, nucleus	66.01	67.0
Zm00001d013804_P003	Maize	golgi, plastid, vacuole	68.23	66.59
Bra015395.1-P	Field mustard	plastid	69.21	65.96
Bra019835.1-P	Field mustard	mitochondrion	58.87	61.13
Bra023296.1-P	Field mustard	golgi	57.64	59.85
Bra010198.1-P	Field mustard	vacuole	55.66	57.36
Bra015654.1-P	Field mustard	golgi	53.45	56.66
Bra031357.1-P	Field mustard	cytosol	46.31	56.29
Bra016393.1-P	Field mustard	golgi	50.49	52.56
Bra012302.1-P	Field mustard	golgi	49.01	50.13
Bra003064.1-P	Field mustard	mitochondrion	33.99	41.44
Bra007804.1-P	Field mustard	plastid	31.03	36.42
Bra011324.1-P	Field mustard	plastid	31.03	36.21
Bra022647.1-P	Field mustard	mitochondrion	34.24	34.49
Bra034289.1-P	Field mustard	plastid	27.83	31.13
Bra001576.1-P	Field mustard	mitochondrion	26.11	30.99
Bra027291.1-P	Field mustard	mitochondrion	25.62	30.32
Bra038114.1-P	Field mustard	mitochondrion	25.86	30.17

Protein Annotations

MapMan:21.4.1.1.5.3	Gene3D:3.90.550.50	EnsemblPlantsGene:Bra010422	EnsemblPlants:Bra010422.1	EnsemblPlants:Bra010422.1-P	ncoils:Coil
InterPro:DUF4094	GO:GO:0000139	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005794	GO:GO:0005975	GO:GO:0006464	GO:GO:0006486
GO:GO:0008150	GO:GO:0008152	GO:GO:0008378	GO:GO:0009058	GO:GO:0009987	GO:GO:0016020
GO:GO:0016021	GO:GO:0016740	GO:GO:0016757	GO:GO:0019538	InterPro:Glyco_trans_31	UniProt:M4D1S2
PFAM:PF01762	PFAM:PF13334	PANTHER:PTHR11214	PANTHER:PTHR11214:SF5	UniParc:UPI0002545855	SEG:seg

Description

AT4G26940 (E=4e-211) | galactosyltransferase family protein

Coordinates

chrA08:+:14451517..14453755

Molecular Weight (calculated)

45641.2 Da

IEP (calculated)

7.131

GRAVY (calculated)

-0.401

Length

406 amino acids

Sequence
(BLAST)

001: MSMKHHHRGG LELSASKSFV SKKLTFFLCI GFFCAGTLFS DRMWPEPEAN VVSREASDER LHLVSDDCDS SKKSLKLESK DSLGEAYKSP DAIQTLDKTI
101: STLEMELVAA RAAQESIMNG SPVSDDFKLP ETATRRKYLM VVGVNTAFSS RKRRDSVRAT WMPPGEDRKK LEEDKGIIMR FVIGHSATPG GILDRAIQAE
201: ESKHGDFLRL DHVEGYLELS AKTKSYFTTA YALWDADFYV KVDDDVHVNI ATLGAELARY RMKPRVYIGC MKSGPVLAQK GVRYHEPEYW KFGEEGNKYF
301: RHATGQLYAI SRELASYISI NQNVLHKYVN EDVSLGSWFL GLDVEHVDDR RLCCGTTDCE WKAQAGNMCV ASFDWSCSGI CRSADRMKDV HRRCGEGPNA
401: LLAASF

Best Arabidopsis Sequence Match ( AT4G26940.1 )
(BLAST)

001: MSLKHHHRGL ELSASKSFVS KKWTLFLCIG FFCAGILFSD RMWPEPESNV VSRDTVASDE RLRLESEDCD SSKKGLKRES KDILGDVYKS PDAIQTLDKT
101: ISKLETELAD ARAAQESIMN GSPVSDDFKL PETVTKRKYL MVVGVNTAFS SRKRRDSVRA TWMPPGEERK KLEEEKGIVM RFVIGHSSTP GGILDRAIQA
201: EESKHGDFLR LDHVEGYLEL SAKTKTYFTT AFAMWDADFY VKVDDDVHVN IATLGAELAR YRMKPRVYIG CMKSGPVLAQ KGVRYHEPEY WKFGEEGNKY
301: FRHATGQLYA ISRELASYIS INQNVLHKYV NEDVSLGSWF LGLDVEHVDD RRLCCGTTDC EWKAQAGNIC VASFDWSCSG ICRSADRMKD VHRRCGEGEK
401: ALLAASF

Arabidopsis Description

B3GALT4Hexosyltransferase [Source:UniProtKB/TrEMBL;Acc:A0A178V3W5]
SUBAcon: [endoplasmic reticulum,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.