Factsheet for Bra001576.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 5
golgi 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX82456	Canola	mitochondrion	99.71	99.71
CDX75799	Canola	mitochondrion	97.95	97.95
Bra027291.1-P	Field mustard	mitochondrion	92.69	92.42
AT3G14960.1	Thale cress	mitochondrion	89.77	89.5
Bra038114.1-P	Field mustard	mitochondrion	84.5	83.05
PGSC0003DMT400054913	Potato	golgi, mitochondrion	73.39	72.13
Solyc10g007200.2.1	Tomato	golgi, mitochondrion	73.1	71.84
PGSC0003DMT400032365	Potato	plastid	73.1	71.43
VIT_19s0014g01490.t01	Wine grape	golgi, mitochondrion, plastid	72.51	71.26
KRH55102	Soybean	plastid	69.88	70.71
KRH26222	Soybean	plastid	69.88	70.71
Solyc07g062590.2.1	Tomato	plastid	72.51	70.66
KRH21986	Soybean	mitochondrion	68.13	69.35
GSMUA_Achr7P14080_001	Banana	golgi, plastid	68.13	67.73
TraesCS7A01G115200.1	Wheat	plastid	68.13	64.19
TraesCS7D01G111900.1	Wheat	plastid	67.84	63.91
Zm00001d036240_P003	Maize	plastid	67.54	63.64
Os06t0156900-01	Rice	golgi, plastid	68.13	63.32
KXG19339	Sorghum	golgi, mitochondrion, plastid	67.25	63.19
TraesCS7B01G013300.1	Wheat	plastid	67.25	62.16
GSMUA_Achr10P...	Banana	mitochondrion	53.51	59.42
Zm00001d045297_P001	Maize	plastid	43.57	58.2
Bra034289.1-P	Field mustard	plastid	58.19	54.82
HORVU7Hr1G024690.2	Barley	mitochondrion, plastid	67.54	53.6
Bra031357.1-P	Field mustard	cytosol	29.53	30.24
Bra016393.1-P	Field mustard	golgi	33.04	28.97
Bra015654.1-P	Field mustard	golgi	30.99	27.68
Bra012302.1-P	Field mustard	golgi	31.29	26.95
Bra023296.1-P	Field mustard	golgi	30.7	26.85
Bra019835.1-P	Field mustard	mitochondrion	30.41	26.6
Bra010422.1-P	Field mustard	cytosol, golgi	30.99	26.11
Bra010198.1-P	Field mustard	vacuole	29.53	25.63
Bra019081.1-P	Field mustard	cytosol	28.66	25.39
Bra015395.1-P	Field mustard	plastid	30.99	24.88
Bra005595.1-P	Field mustard	golgi	29.53	24.69
Bra003064.1-P	Field mustard	mitochondrion	22.51	23.12
Bra007804.1-P	Field mustard	plastid	23.1	22.83
Bra011324.1-P	Field mustard	plastid	22.81	22.41
Bra022647.1-P	Field mustard	mitochondrion	23.1	19.6

Protein Annotations

MapMan:21.4.1.1.5.3	EnsemblPlantsGene:Bra001576	EnsemblPlants:Bra001576.1	EnsemblPlants:Bra001576.1-P	GO:GO:0000139	GO:GO:0003674
GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005794
GO:GO:0005975	GO:GO:0006464	GO:GO:0006486	GO:GO:0008150	GO:GO:0008152	GO:GO:0008378
GO:GO:0009058	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016740	GO:GO:0016757
GO:GO:0019538	InterPro:Glyco_trans_31	UniProt:M4CBJ6	PFAM:PF01762	PANTHER:PTHR11214	PANTHER:PTHR11214:SF108
TMHMM:TMhelix	UniParc:UPI00025409E4	:	:	:	:

Description

AT3G14960 (E=3e-176) | galactosyltransferase family protein

Coordinates

chrA03:-:17154591..17156779

Molecular Weight (calculated)

38507.6 Da

IEP (calculated)

9.118

GRAVY (calculated)

-0.222

Length

342 amino acids

Sequence
(BLAST)

001: MPSSPRLKLF HARPSRRPTS LIVITSIAIG LFGFLFGLSA IIFPGIRLSS RTCLTNSPPK TVRIVWDVAG NRNANGGVKR HKVMGFVGIQ TGFSSAGRRR
101: ALRNTWMPSD PQGLRRLEES TGLAIRFIIG KTKDEAKMAE LRREIAEYDD FILLDIEEEY SKLPYKTLAF FKAAYALYDS AFYVKADDDI YLRPDRLSLL
201: LAKERSHSQT YLGCLKKGPV FTDPKLKWYE PLADLLGQEY FLHAYGPIYA LSADVVTSLV ALKNNSFRMF SNEDVTIGAW MLAMNVNHEN HKTLCEPECS
301: PSSIAVWDIP KCSGLCNPEK RMLELHKKES CSKSPTLPSE DE

Best Arabidopsis Sequence Match ( AT3G14960.1 )
(BLAST)

001: MSSSPKLFHA RPSFFTRRST PLIVFTSLAI GLTGFLFGLS TILFPGLRLS GRSCLTNLPP KTVKIVWDVA GNSIVNGEVK RHKVMGFVGI QTGFRSAGRR
101: RALRNTWMPS DPEGLRRLEE STGLAIRFII GKTKDEAKMV ELRSEVAMYD DFILLDIEEE YSKLPYKTLA FFKAAYALYD SEFYVKADDD IYLRPDRLSL
201: LLAKERGHSQ TYLGCMKKGP VFTDPKLKWY EPLADLLGKE YFLHAYGPIY ALSADVVTSL VALKNNSFRM FSNEDVTIGA WMLAMNVNHE NLHTLCEPEC
301: SPYSIAVWDI PKCSGLCNPE KRMLELHMLE SCSKSPTLPS DDE

Arabidopsis Description

B3GALT13Hexosyltransferase (Fragment) [Source:UniProtKB/TrEMBL;Acc:W8Q363]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.