Factsheet for Bra022647.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 5
golgi 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	golgi
Plant-mPloc:	plastid
Predotar:	mitochondrion
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY49171	Canola	mitochondrion	80.15	96.42
CDX96213	Canola	mitochondrion	78.91	94.93
Bra003064.1-P	Field mustard	mitochondrion	75.93	91.89
AT5G53340.1	Thale cress	mitochondrion	75.19	89.64
KRH64518	Soybean	mitochondrion	56.82	66.76
KRH53422	Soybean	mitochondrion	56.82	66.76
GSMUA_Achr4P00940_001	Banana	mitochondrion	54.34	64.99
VIT_16s0050g02460.t01	Wine grape	mitochondrion	53.1	62.57
PGSC0003DMT400023412	Potato	mitochondrion	52.85	60.68
Os08t0386700-01	Rice	mitochondrion	49.88	58.6
EES13774	Sorghum	mitochondrion	49.63	57.8
TraesCS7A01G293200.1	Wheat	mitochondrion	49.13	57.39
TraesCS7D01G286500.1	Wheat	mitochondrion	48.88	57.1
HORVU7Hr1G063510.5	Barley	mitochondrion	48.64	56.65
TraesCS7B01G185900.1	Wheat	mitochondrion	48.39	56.52
Zm00001d050251_P002	Maize	mitochondrion	46.9	46.55
Zm00001d032267_P003	Maize	mitochondrion	45.16	44.83
Bra007804.1-P	Field mustard	plastid	34.99	40.75
Bra011324.1-P	Field mustard	plastid	34.74	40.23
Bra005595.1-P	Field mustard	golgi	35.98	35.45
Bra019835.1-P	Field mustard	mitochondrion	34.24	35.29
Bra031357.1-P	Field mustard	cytosol	28.78	34.73
Bra023296.1-P	Field mustard	golgi	33.5	34.53
Bra010422.1-P	Field mustard	cytosol, golgi	34.49	34.24
Bra010198.1-P	Field mustard	vacuole	33.25	34.01
Bra015395.1-P	Field mustard	plastid	35.73	33.8
Bra019081.1-P	Field mustard	cytosol	31.02	32.38
Bra016393.1-P	Field mustard	golgi	31.02	32.05
Bra015654.1-P	Field mustard	golgi	30.27	31.85
Bra012302.1-P	Field mustard	golgi	29.28	29.72
Bra034289.1-P	Field mustard	plastid	21.59	23.97
Bra038114.1-P	Field mustard	mitochondrion	20.35	23.56
Bra027291.1-P	Field mustard	mitochondrion	19.85	23.32
Bra001576.1-P	Field mustard	mitochondrion	19.6	23.1

Protein Annotations

MapMan:18.1.2.1.2	EnsemblPlantsGene:Bra022647	EnsemblPlants:Bra022647.1	EnsemblPlants:Bra022647.1-P	ncoils:Coil	InterPro:DUF4094
GO:GO:0000139	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005794	GO:GO:0005975	GO:GO:0006464	GO:GO:0006486	GO:GO:0008150
GO:GO:0008152	GO:GO:0008378	GO:GO:0009058	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021
GO:GO:0016740	GO:GO:0016757	GO:GO:0019538	InterPro:Glyco_trans_31	UniProt:M4E1J7	PFAM:PF01762
PFAM:PF13334	PANTHER:PTHR11214	PANTHER:PTHR11214:SF224	UniParc:UPI0002546C09	SEG:seg	:

Description

AT5G53340 (E=1e-165) | galactosyltransferase family protein

Coordinates

chrA02:+:8281698..8284811

Molecular Weight (calculated)

45734.4 Da

IEP (calculated)

9.699

GRAVY (calculated)

-0.449

Length

403 amino acids

Sequence
(BLAST)

001: MARKGTSMRL TSSRVSSLLL SMFSTFASFY VAGRLWQESQ TRVHFISELH RVTGQGKSAI SVDDTLKIIA CREQKKTLAA LEMELSAARQ QGFVPKHADV
101: AETKKRPLVV IGIMTSLGNR KKRDAVRQAW MGTGASLKKI ETEKGVIARF VIGRSANKGD SMDKSIDAEN SLTDDFIVLD DVVEAPEEAS KKVKLFFAYA
201: ADRWDAQFYA KANDNIYVNI DALGSTLAAH LGKPRAYIGC MKSGEVFSEP NQKWYEPEWW KFGDKKAYFR HAYGEMYVIT NALARFVSIN RDILHSYAHD
301: DVSTGSWFVG LDVKHVDEGK FCCSAWSSGR DTAGWYGLHG QITRTETKHD TGVVRMVEEI RREKLASGYR SQLQSEEYQD RRIHSEKDYS SFRFCIRPFR
401: KKF

Best Arabidopsis Sequence Match ( AT5G53340.1 )
(BLAST)

001: MARKGSSIRL SSSRISTLLL FMFATFASFY VAGRLWQESQ TRVHLINELD RVTGQGKSAI SVDDTLKIIA CREQKKTLAA LEMELSSARQ EGFVSKSPKL
101: ADGTETKKRP LVVIGIMTSL GNKKKRDAVR QAWMGTGASL KKLESEKGVI ARFVIGRSAN KGDSMDKSID TENSQTDDFI ILDDVVEAPE EASKKVKLFF
201: AYAADRWDAQ FYAKAIDNIY VNIDALGTTL AAHLENPRAY IGCMKSGEVF SEPNHKWYEP EWWKFGDKKA YFRHAYGEMY VITHALARFV SINRDILHSY
301: AHDDVSTGSW FVGLDVKHVD EGKFCCSAWS SEAICAGV

Arabidopsis Description

HPTG1Hydroxyproline O-galactosyltransferase HPGT1 [Source:UniProtKB/Swiss-Prot;Acc:Q94F27]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.