Factsheet for Bra019081.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
mitochondrion 3
endoplasmic reticulum 1
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra024839.1-P
Bra024840.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G26940.1	Bra024839.1-P	AT2G01950.1	19000166
AT4G26940.1	Bra024840.1-P	AT2G01950.1	19000166

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY68943	Canola	golgi	78.5	85.84
CDY11037	Canola	golgi, mitochondrion, plastid	79.27	85.24
Bra010422.1-P	Field mustard	cytosol, golgi	89.38	84.98
AT4G26940.1	Thale cress	endoplasmic reticulum, golgi	88.34	83.78
VIT_19s0090g00560.t01	Wine grape	cytosol, golgi	72.02	68.64
PGSC0003DMT400057471	Potato	golgi	72.02	68.14
Solyc07g064670.2.1	Tomato	nucleus	71.76	67.89
Bra005595.1-P	Field mustard	golgi	69.43	65.53
PGSC0003DMT400071658	Potato	golgi	65.8	65.13
GSMUA_Achr4P33450_001	Banana	golgi	67.62	64.76
GSMUA_Achr4P23710_001	Banana	golgi	69.17	64.65
GSMUA_Achr7P00260_001	Banana	golgi	67.62	64.29
EER91307	Sorghum	golgi, peroxisome, plasma membrane	66.32	62.59
Os03t0577500-01	Rice	golgi, peroxisome, plastid	65.03	61.82
Zm00001d013804_P003	Maize	golgi, plastid, vacuole	66.06	61.3
Bra015395.1-P	Field mustard	plastid	67.62	61.27
TraesCS7D01G339200.1	Wheat	cytosol, golgi, mitochondrion, plastid	63.47	61.25
HORVU7Hr1G081720.2	Barley	cytosol	63.21	61.15
TraesCS7A01G330900.1	Wheat	cytosol, golgi, mitochondrion, plastid	62.95	60.75
TraesCS7B01G241500.2	Wheat	cytosol, golgi, mitochondrion, nucleus	62.95	60.75
Bra019835.1-P	Field mustard	mitochondrion	55.96	55.24
Bra023296.1-P	Field mustard	golgi	55.18	54.48
Bra015654.1-P	Field mustard	golgi	51.3	51.7
Bra010198.1-P	Field mustard	vacuole	52.59	51.52
Bra031357.1-P	Field mustard	cytosol	44.04	50.9
Bra016393.1-P	Field mustard	golgi	48.45	47.95
Bra012302.1-P	Field mustard	golgi	47.15	45.84
Bra003064.1-P	Field mustard	mitochondrion	32.12	37.24
Bra007804.1-P	Field mustard	plastid	29.53	32.95
Bra011324.1-P	Field mustard	plastid	29.02	32.18
Bra022647.1-P	Field mustard	mitochondrion	32.38	31.02
Bra034289.1-P	Field mustard	plastid	27.98	29.75
Bra001576.1-P	Field mustard	mitochondrion	25.39	28.66
Bra027291.1-P	Field mustard	mitochondrion	25.13	28.28
Bra038114.1-P	Field mustard	mitochondrion	25.13	27.87

Protein Annotations

MapMan:21.4.1.1.5.3	EnsemblPlantsGene:Bra019081	EnsemblPlants:Bra019081.1	EnsemblPlants:Bra019081.1-P	InterPro:DUF4094	GO:GO:0000139
GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005794	GO:GO:0005975	GO:GO:0006464	GO:GO:0006486	GO:GO:0008150	GO:GO:0008152
GO:GO:0008378	GO:GO:0009058	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016740
GO:GO:0016757	GO:GO:0019538	InterPro:Glyco_trans_31	UniProt:M4DRD8	PFAM:PF01762	PFAM:PF13334
PANTHER:PTHR11214	PANTHER:PTHR11214:SF5	UniParc:UPI000254125F	SEG:seg	:	:

Description

AT4G26940 (E=8e-141) | galactosyltransferase family protein

Coordinates

chrA03:-:26426020..26428136

Molecular Weight (calculated)

43358.4 Da

IEP (calculated)

7.132

GRAVY (calculated)

-0.437

Length

386 amino acids

Sequence
(BLAST)

001: MSLKHHHHRG VELSSASKSF VSKKWTFLLC IGFFCAGTLF SDRMWPEPEA NVASSREAAS DERLLLMSED CDSSKTSLGE VYKSPDATQT LDKTISALEM
101: ELTAARAAQE SIVNGSPVSD VFKLPETVTK RKYLMVVGIN TAFNSRKRRD SVRATWMPPG EERKKLEEEK GIVMRFVIGH SATPGGILDR AIQAEESKHG
201: DFLRLDHVEG YLELSAKTKS YFTTAFALWD ADFYVKVDDD VHVNIATLGA ELARYRTKPR VYIGCMKSGP VLAQKGVRYH EPEYWKFGEE GNKNVLHKYV
301: NEDVSLGSWF LGLDVEHADD RRLCCGTTDC EWKAQAGNMC VASFDWRCSG ICRSADRMKD VHRRCGEGPN ALMAASFRNK ITEDTH

Best Arabidopsis Sequence Match ( AT4G26940.1 )
(BLAST)

001: MSLKHHHRGL ELSASKSFVS KKWTLFLCIG FFCAGILFSD RMWPEPESNV VSRDTVASDE RLRLESEDCD SSKKGLKRES KDILGDVYKS PDAIQTLDKT
101: ISKLETELAD ARAAQESIMN GSPVSDDFKL PETVTKRKYL MVVGVNTAFS SRKRRDSVRA TWMPPGEERK KLEEEKGIVM RFVIGHSSTP GGILDRAIQA
201: EESKHGDFLR LDHVEGYLEL SAKTKTYFTT AFAMWDADFY VKVDDDVHVN IATLGAELAR YRMKPRVYIG CMKSGPVLAQ KGVRYHEPEY WKFGEEGNKY
301: FRHATGQLYA ISRELASYIS INQNVLHKYV NEDVSLGSWF LGLDVEHVDD RRLCCGTTDC EWKAQAGNIC VASFDWSCSG ICRSADRMKD VHRRCGEGEK
401: ALLAASF

Arabidopsis Description

B3GALT4Hexosyltransferase [Source:UniProtKB/TrEMBL;Acc:A0A178V3W5]
SUBAcon: [endoplasmic reticulum,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.