CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

nucleus 1
plastid 1
golgi 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	golgi, nucleus
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	golgi
PProwler:	secretory
YLoc:	golgi

PPI

Inferred distinct locusB in Crop

locusB	locations
CDY03088
CDY17621

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G26940.1	CDY03088	AT2G01950.1	19000166
AT4G26940.1	CDY17621	AT2G01950.1	19000166

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY11037	Canola	golgi, mitochondrion, plastid	93.2	91.64
Bra019081.1-P	Field mustard	cytosol	85.84	78.5
CDX92791	Canola	cytosol	87.82	77.11
CDY46675	Canola	cytosol	88.1	75.85
CDX97371	Canola	cytosol, endoplasmic reticulum	83.29	72.59
CDY14294	Canola	cytosol, golgi	82.15	71.43
AT4G26940.1	Thale cress	endoplasmic reticulum, golgi	81.87	71.01
VIT_19s0090g00560.t01	Wine grape	cytosol, golgi	66.86	58.27
Solyc07g064670.2.1	Tomato	nucleus	65.44	56.62
PGSC0003DMT400057471	Potato	golgi	65.44	56.62
CDY48266	Canola	golgi	64.87	55.99
CDY12206	Canola	golgi	64.59	55.75
CDY46836	Canola	plastid	64.02	55.53
PGSC0003DMT400071658	Potato	golgi	61.19	55.38
CDY49507	Canola	plastid	64.31	55.37
GSMUA_Achr7P00260_001	Banana	golgi	62.32	54.19
GSMUA_Achr4P33450_001	Banana	golgi	61.76	54.09
Os03t0577500-01	Rice	golgi, peroxisome, plastid	62.04	53.94
EER91307	Sorghum	golgi, peroxisome, plasma membrane	62.04	53.55
GSMUA_Achr4P23710_001	Banana	golgi	62.61	53.51
TraesCS7D01G339200.1	Wheat	cytosol, golgi, mitochondrion, plastid	60.34	53.25
TraesCS7B01G241500.2	Wheat	cytosol, golgi, mitochondrion, nucleus	60.34	53.25
HORVU7Hr1G081720.2	Barley	cytosol	60.06	53.13
TraesCS7A01G330900.1	Wheat	cytosol, golgi, mitochondrion, plastid	60.06	53.0
Zm00001d013804_P003	Maize	golgi, plastid, vacuole	60.91	51.68
CDX97981	Canola	mitochondrion	52.12	47.06
CDY49800	Canola	mitochondrion	51.56	46.55
CDX93812	Canola	golgi	50.42	45.52
CDX87501	Canola	golgi	47.88	44.13
CDX73278	Canola	vacuole	49.01	43.91
CDY67379	Canola	vacuole	49.01	43.91
CDX88390	Canola	golgi	47.03	43.46
CDY04694	Canola	golgi	44.48	41.98
CDX96559	Canola	cytosol, nucleus, peroxisome	41.36	41.83
CDY30641	Canola	golgi	44.19	41.71
CDY54843	Canola	golgi	50.71	40.87
CDY38836	Canola	golgi	44.48	40.26
CDY00412	Canola	golgi	43.91	39.04
CDY01303	Canola	golgi	40.51	37.05
CDX96213	Canola	mitochondrion	32.86	34.63
CDY14386	Canola	mitochondrion	33.14	34.51
CDY49171	Canola	mitochondrion	32.29	34.03
CDY35642	Canola	mitochondrion	32.58	34.02
CDY58927	Canola	cytosol	30.03	30.81
CDX75222	Canola	plastid	30.31	30.75
CDX68818	Canola	plastid	30.31	30.66
CDY11534	Canola	plastid	29.75	30.43
CDY35316	Canola	plastid	24.65	23.97
CDX77030	Canola	plastid	24.36	23.69
CDX82456	Canola	mitochondrion	22.38	23.1
CDX75799	Canola	mitochondrion	22.38	23.1
CDX97620	Canola	mitochondrion	21.81	22.51
CDY55849	Canola	mitochondrion	22.1	22.41
CDY55848	Canola	mitochondrion	22.1	22.41
CDY25866	Canola	mitochondrion	22.1	22.41
CDX98518	Canola	mitochondrion	22.1	22.22
CDY42221	Canola	cytosol	6.52	17.69

Protein Annotations

MapMan:35.1	GO:A0A078JN51	UniProt:A0A078JN51	EnsemblPlants:CDY68943	ProteinID:CDY68943	ProteinID:CDY68943.1
InterPro:DUF4094	GO:GO:0000139	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005794	GO:GO:0005975	GO:GO:0006464	GO:GO:0006486
GO:GO:0008150	GO:GO:0008152	GO:GO:0008378	GO:GO:0009058	GO:GO:0009987	GO:GO:0016020
GO:GO:0016021	GO:GO:0016740	GO:GO:0016757	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00081461001	InterPro:Glyco_trans_31
PFAM:PF01762	PFAM:PF13334	PANTHER:PTHR11214	PANTHER:PTHR11214:SF5	UniPathway:UPA00378	UniParc:UPI0004EDDE05
SEG:seg	:	:	:	:	:

Description

BnaAnng28870DHexosyltransferase (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A078JN51]

Coordinates

chrLK038309:+:2..2466

Molecular Weight (calculated)

39742.2 Da

IEP (calculated)

6.292

GRAVY (calculated)

-0.278

Length

353 amino acids

Sequence
(BLAST)

001: FVLICVVETQ QNVVKHHHHR GVELSAVSKS FVSKKWTFLL CISFFCAGTL FSDRMWPEPE ANVASREAAS DERLLLLSED FDSSKTSLGE VYKSPDATQS
101: LDKTISAMEM ELAAARAAQE SITNGSPVSD EFNLPETVTK RKYLMVFGIN TAFNSRKRRD SVRTTWMPPG EERKKLEEEK GIVMRFVIGH SATPGGILDR
201: AIQAEEHKHG DSLRLDHVEG YLELSAKTKS YFTTAFALWD AYFYVKVDDD VHVNIATLGA EIARYRTKPR VYIGCMKCGP VLAQKGVRYH EPEELASYIS
301: INKNVLHKYV NEDVSFGSWF LGLDVENVDD RRLCCESADC EWKAQAGNVC CVV

Best Arabidopsis Sequence Match ( AT1G05170.1 )
(BLAST)

001: MSAKIKGEYS SRSFVSRKWT ILLCLGSFCV GMFFTNRMWN IPESKGMSHP SVTEAERLKL VSEGCNPKAL YQKEVKRDPQ ALFGEVANTH IALQTLDKTI
101: SSLEMELAAA RSVQESLQNG APLSDDMGKK QPQEQRRFLM VVGINTAFSS RKRRDSIRAT WMPQGEKRKR LEEEKGIIIR FVIGHSATTG GILDRAIEAE
201: DRKHGDFLRL DHVEGYLELS GKTKTYFSTA FSMWDADFYV KVDDDVHVNI ATLGETLVRH RKKPRVYIGC MKSGPVLSQK GVRYHEPEYW KFGENGNKYF
301: RHATGQLYAI SRDLASYISI NQHVLHKYAN EDVSLGAWFI GIDVKHIDDR RLCCGTPPGK S

Arabidopsis Description

B3GALT2Hexosyltransferase (Fragment) [Source:UniProtKB/TrEMBL;Acc:W8Q3U9]
SUBAcon: [golgi,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.