CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
mitochondrion 2
golgi 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY42221	Canola	cytosol	35.54	99.23
CDY35316	Canola	plastid	98.07	98.07
AT2G26100.1	Thale cress	plastid	87.05	85.18
VIT_04s0008g01270.t01	Wine grape	plastid	69.7	70.08
VIT_13s0158g00110.t01	Wine grape	cytosol	17.63	69.57
CDX97620	Canola	mitochondrion	55.1	58.48
CDX82456	Canola	mitochondrion	54.55	57.89
CDX98518	Canola	mitochondrion	55.92	57.83
CDY25866	Canola	mitochondrion	55.37	57.76
CDY55848	Canola	mitochondrion	55.37	57.76
CDY55849	Canola	mitochondrion	55.1	57.47
CDX75799	Canola	mitochondrion	53.72	57.02
GSMUA_Achr6P05430_001	Banana	endoplasmic reticulum, nucleus, plastid	55.92	53.99
Os05t0199500-01	Rice	mitochondrion	51.79	48.21
TraesCS1A01G125600.1	Wheat	cytosol, golgi, peroxisome	49.86	48.14
TraesCS1B01G144600.1	Wheat	cytosol, golgi, peroxisome	49.59	47.87
TraesCS1D01G127900.1	Wheat	cytosol, golgi, peroxisome	49.59	47.87
Zm00001d009997_P001	Maize	plasma membrane	47.93	46.4
EES19194	Sorghum	golgi, peroxisome, plastid	47.66	46.13
HORVU1Hr1G029110.2	Barley	cytosol, plasma membrane, plastid	49.31	39.87
CDX92791	Canola	cytosol	31.68	28.61
CDY46675	Canola	cytosol	31.96	28.29
CDX97371	Canola	cytosol, endoplasmic reticulum	30.85	27.65
CDY14294	Canola	cytosol, golgi	30.85	27.59
CDX96559	Canola	cytosol, nucleus, peroxisome	26.45	27.51
CDX93812	Canola	golgi	28.93	26.85
CDY46836	Canola	plastid	29.75	26.54
CDY30641	Canola	golgi	27.27	26.47
CDX96213	Canola	mitochondrion	24.24	26.27
CDY04694	Canola	golgi	27.0	26.2
CDY49507	Canola	plastid	29.48	26.1
CDY49171	Canola	mitochondrion	23.97	25.97
CDX97981	Canola	mitochondrion	27.82	25.83
CDY49800	Canola	mitochondrion	27.82	25.83
CDY12206	Canola	golgi	28.93	25.67
CDX88390	Canola	golgi	27.0	25.65
CDY38836	Canola	golgi	27.55	25.64
CDY35642	Canola	mitochondrion	23.69	25.44
CDY14386	Canola	mitochondrion	23.69	25.37
CDX87501	Canola	golgi	26.72	25.33
CDY11534	Canola	plastid	23.97	25.22
CDY48266	Canola	golgi	28.1	24.94
CDY67379	Canola	vacuole	27.0	24.87
CDX73278	Canola	vacuole	27.0	24.87
CDX75222	Canola	plastid	23.69	24.71
CDY58927	Canola	cytosol	23.42	24.71
CDY00412	Canola	golgi	27.0	24.69
CDX68818	Canola	plastid	23.69	24.64
CDY11037	Canola	golgi, mitochondrion, plastid	24.24	24.51
CDY68943	Canola	golgi	23.69	24.36
CDY54843	Canola	golgi	28.93	23.97
CDY01303	Canola	golgi	23.69	22.28

Protein Annotations

MapMan:21.4.1.1.5.3	GO:A0A078CJI8	EnsemblPlants:CDX77030	ProteinID:CDX77030	ProteinID:CDX77030.1	ncoils:Coil
GO:GO:0000139	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005794	GO:GO:0005975	GO:GO:0006464	GO:GO:0006486	GO:GO:0008150
GO:GO:0008152	GO:GO:0008378	GO:GO:0009058	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021
GO:GO:0016740	GO:GO:0016757	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00127599001	InterPro:Glyco_trans_31	PFAM:PF01762
PANTHER:PTHR11214	PANTHER:PTHR11214:SF85	TMHMM:TMhelix	UniPathway:UPA00378	UniParc:UPI0004EB306A	SEG:seg

Description

BnaC04g38250D

Coordinates

chrLK031809:-:561082..563126

Molecular Weight (calculated)

40580.6 Da

IEP (calculated)

8.615

GRAVY (calculated)

-0.297

Length

363 amino acids

Sequence
(BLAST)

001: MPLFSHRFVT ASSTGPATPS YYSKPSKSHK HSSSASRVHV AIVLFSLVSL FIGLAGTIFA ITSSGGPSSV YRCGGSKDTS RVFGSRKLGG NGDVLPERRK
101: VIGFVGIQTG FDYGDRRAAL RSTWFPSDPD ALLRLEQATG LAFRFVIGRS KDEKKMAELE KEIKEHRDFV LLDDVEEEYL RLPYKTLAFF KAAFKLFEAD
201: YYVKADDDIY LRPDRLGTLL AKERLHSQTY IGCMKKGPVI TNPKLKWYEK QGNLIGNEYF LHAYGPMYVL SAEIVASLAS ARNGSLRMFN NEDVTIGSWM
301: LAMDVHHEDN RALCEPRCSP KSIAVWDIPK CSGLCNPESR LKELHNMDIC SKSPTLPPDD LDQ

Best Arabidopsis Sequence Match ( AT2G26100.1 )
(BLAST)

001: MPLFSHRFTT ASSSSPASPS YYNKPSSKTH KPNSSSSSYT SSRIHVAIIF FSLVSVFIGV AGTIFALSST GPASVYRCGG SKDTSRVVSA SRKLGGDGGN
101: NGVVVERRKL LGFVGIQTGF DSGDRRTALR STWFPSDPDS LLRLEQATGL AFRFVIGKSK DAKKMAELEK EIKEYRDFVL LDTEEEYIRL PYKTLAFFKA
201: AFKLFEADYY VKADDDIYLR PDRLATLLAN ERLHSQTYIG CMKKGPVITD PKLKWYEKQG NLIGNEYFLH AYGPIYVLSA EIVASLAAAR NGSLRMFNNE
301: DVTIGSWMLA MDVHHEDNRA LCDPHCSPKS IAVWDIPKCS GLCDPESRLK ELHKTDMCSK SPTLPPDDID Q

Arabidopsis Description

B3GALT12Hexosyltransferase [Source:UniProtKB/TrEMBL;Acc:A0A178VU65]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.