Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 7
- mitochondrion 1
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY42221 | Canola | cytosol | 32.08 | 91.54 |
| Bra034289.1-P | Field mustard | plastid | 85.44 | 87.33 |
| CDX77030 | Canola | plastid | 85.18 | 87.05 |
| CDY35316 | Canola | plastid | 84.91 | 86.78 |
| VIT_04s0008g01270.t01 | Wine grape | plastid | 67.92 | 69.81 |
| VIT_13s0158g00110.t01 | Wine grape | cytosol | 16.44 | 66.3 |
| AT3G14960.1 | Thale cress | mitochondrion | 53.64 | 58.02 |
| AT1G53290.1 | Thale cress | mitochondrion | 53.91 | 57.97 |
| GSMUA_Achr6P05430_001 | Banana | endoplasmic reticulum, nucleus, plastid | 53.91 | 53.19 |
| TraesCS1B01G144600.1 | Wheat | cytosol, golgi, peroxisome | 49.33 | 48.67 |
| TraesCS1A01G125600.1 | Wheat | cytosol, golgi, peroxisome | 49.33 | 48.67 |
| Os05t0199500-01 | Rice | mitochondrion | 50.67 | 48.21 |
| TraesCS1D01G127900.1 | Wheat | cytosol, golgi, peroxisome | 48.79 | 48.14 |
| Zm00001d009997_P001 | Maize | plasma membrane | 47.44 | 46.93 |
| EES19194 | Sorghum | golgi, peroxisome, plastid | 46.9 | 46.4 |
| HORVU1Hr1G029110.2 | Barley | cytosol, plasma membrane, plastid | 48.52 | 40.09 |
| AT4G26940.1 | Thale cress | endoplasmic reticulum, golgi | 29.92 | 27.27 |
| AT1G77810.1 | Thale cress | golgi | 26.95 | 25.84 |
| AT1G32930.1 | Thale cress | golgi | 27.76 | 25.81 |
| AT1G05170.2 | Thale cress | cytosol, golgi | 28.3 | 25.8 |
| AT5G53340.1 | Thale cress | mitochondrion | 23.45 | 25.74 |
| AT1G22015.1 | Thale cress | golgi | 27.49 | 25.63 |
| AT1G11730.1 | Thale cress | golgi, mitochondrion | 26.42 | 25.52 |
| AT4G32120.1 | Thale cress | golgi, nucleus, peroxisome | 23.72 | 25.51 |
| AT2G25300.1 | Thale cress | plastid | 23.72 | 25.43 |
| AT2G32430.1 | Thale cress | golgi | 27.76 | 25.18 |
| AT1G33430.2 | Thale cress | golgi, vacuole | 26.42 | 24.32 |
Protein Annotations
| MapMan:21.4.1.1.5.3 | EntrezGene:817150 | UniProt:A0A178VU65 | ProteinID:AAC31227.1 | ProteinID:AEC07794.1 | ArrayExpress:AT2G26100 |
| EnsemblPlantsGene:AT2G26100 | RefSeq:AT2G26100 | TAIR:AT2G26100 | RefSeq:AT2G26100-TAIR-G | EnsemblPlants:AT2G26100.1 | TAIR:AT2G26100.1 |
| EMBL:BT015330 | EMBL:BT015706 | GO:GO:0000139 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005794 | GO:GO:0005975 | GO:GO:0006464 |
| GO:GO:0006486 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008378 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016740 | GO:GO:0016757 | GO:GO:0019538 | InterPro:Glyco_trans_31 |
| EMBL:KJ138897 | RefSeq:NP_180179.2 | ProteinID:OAP09960.1 | PFAM:PF01762 | PO:PO:0000293 | PANTHER:PTHR11214 |
| PANTHER:PTHR11214:SF85 | UniProt:Q66GS2 | TMHMM:TMhelix | UniParc:UPI0000196C89 | UniProt:W8PV11 | SEG:seg |
Description
B3GALT12Hexosyltransferase [Source:UniProtKB/TrEMBL;Acc:A0A178VU65]
Coordinates
chr2:-:11115873..11118362
Molecular Weight (calculated)
41219.1 Da
IEP (calculated)
8.440
GRAVY (calculated)
-0.301
Length
371 amino acids
Sequence
(BLAST)
(BLAST)
001: MPLFSHRFTT ASSSSPASPS YYNKPSSKTH KPNSSSSSYT SSRIHVAIIF FSLVSVFIGV AGTIFALSST GPASVYRCGG SKDTSRVVSA SRKLGGDGGN
101: NGVVVERRKL LGFVGIQTGF DSGDRRTALR STWFPSDPDS LLRLEQATGL AFRFVIGKSK DAKKMAELEK EIKEYRDFVL LDTEEEYIRL PYKTLAFFKA
201: AFKLFEADYY VKADDDIYLR PDRLATLLAN ERLHSQTYIG CMKKGPVITD PKLKWYEKQG NLIGNEYFLH AYGPIYVLSA EIVASLAAAR NGSLRMFNNE
301: DVTIGSWMLA MDVHHEDNRA LCDPHCSPKS IAVWDIPKCS GLCDPESRLK ELHKTDMCSK SPTLPPDDID Q
101: NGVVVERRKL LGFVGIQTGF DSGDRRTALR STWFPSDPDS LLRLEQATGL AFRFVIGKSK DAKKMAELEK EIKEYRDFVL LDTEEEYIRL PYKTLAFFKA
201: AFKLFEADYY VKADDDIYLR PDRLATLLAN ERLHSQTYIG CMKKGPVITD PKLKWYEKQG NLIGNEYFLH AYGPIYVLSA EIVASLAAAR NGSLRMFNNE
301: DVTIGSWMLA MDVHHEDNRA LCDPHCSPKS IAVWDIPKCS GLCDPESRLK ELHKTDMCSK SPTLPPDDID Q
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.