Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, golgi, nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 2
- golgi 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX68818 | Canola | plastid | 93.04 | 91.98 |
| CDX75222 | Canola | plastid | 92.46 | 91.67 |
| Bra011324.1-P | Field mustard | plastid | 92.46 | 91.67 |
| AT2G25300.1 | Thale cress | plastid | 82.32 | 82.08 |
| VIT_04s0008g06480.t01 | Wine grape | golgi | 75.65 | 76.99 |
| KRH05191 | Soybean | mitochondrion, plastid | 69.28 | 74.92 |
| Solyc08g029170.2.1 | Tomato | plastid | 71.01 | 69.01 |
| KRH15831 | Soybean | mitochondrion | 75.65 | 65.41 |
| EER87954 | Sorghum | plastid | 66.67 | 65.16 |
| GSMUA_Achr8P24200_001 | Banana | cytosol | 67.54 | 64.72 |
| Zm00001d045146_P002 | Maize | plasma membrane | 66.09 | 64.59 |
| Os06t0177300-01 | Rice | golgi, mitochondrion, peroxisome, plastid | 66.09 | 64.41 |
| Os06t0176200-01 | Rice | golgi, mitochondrion, peroxisome, plastid | 66.09 | 64.41 |
| TraesCS7D01G141100.1 | Wheat | cytosol, golgi, mitochondrion, peroxisome, plastid | 63.48 | 61.86 |
| TraesCS7A01G139800.1 | Wheat | cytosol, golgi, mitochondrion, peroxisome, plastid | 63.19 | 61.24 |
| TraesCS7B01G041500.1 | Wheat | cytosol, golgi, mitochondrion, peroxisome, plastid | 62.9 | 60.61 |
| OQU75947 | Sorghum | mitochondrion | 63.19 | 59.56 |
| HORVU7Hr1G028670.1 | Barley | cytosol, golgi, plastid | 63.48 | 58.24 |
| AT5G53340.1 | Thale cress | mitochondrion | 40.58 | 41.42 |
| AT1G32930.1 | Thale cress | golgi | 36.52 | 31.58 |
| AT1G11730.1 | Thale cress | golgi, mitochondrion | 34.78 | 31.25 |
| AT1G33430.2 | Thale cress | golgi, vacuole | 35.94 | 30.77 |
| AT1G77810.1 | Thale cress | golgi | 34.49 | 30.75 |
| AT1G05170.2 | Thale cress | cytosol, golgi | 36.23 | 30.71 |
| AT4G26940.1 | Thale cress | endoplasmic reticulum, golgi | 35.94 | 30.47 |
| AT2G32430.1 | Thale cress | golgi | 35.94 | 30.32 |
| AT1G22015.1 | Thale cress | golgi | 32.75 | 28.39 |
| AT2G26100.1 | Thale cress | plastid | 25.51 | 23.72 |
| AT1G53290.1 | Thale cress | mitochondrion | 23.48 | 23.48 |
| AT3G14960.1 | Thale cress | mitochondrion | 23.19 | 23.32 |
Protein Annotations
| MapMan:18.1.2.1.2 | EntrezGene:829344 | ProteinID:AEE86008.1 | EMBL:AK118332 | EMBL:AK175646 | ArrayExpress:AT4G32120 |
| EnsemblPlantsGene:AT4G32120 | RefSeq:AT4G32120 | TAIR:AT4G32120 | RefSeq:AT4G32120-TAIR-G | EnsemblPlants:AT4G32120.1 | TAIR:AT4G32120.1 |
| EMBL:AY050775 | EMBL:AY113951 | Unigene:At.25086 | ProteinID:CAA16577.1 | ProteinID:CAB79930.1 | ncoils:Coil |
| InterPro:DUF4094 | GO:GO:0000139 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005794 | GO:GO:0005975 | GO:GO:0006464 | GO:GO:0006486 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008378 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0010405 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016740 | GO:GO:0016757 | GO:GO:0018258 | GO:GO:0019538 |
| GO:GO:1990714 | InterPro:Glyco_trans_31 | EMBL:KJ138729 | RefSeq:NP_194939.1 | PFAM:PF01762 | PFAM:PF13334 |
| PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001017 |
| PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 |
| PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 |
| PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 |
| PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 |
| PO:PO:0025022 | PO:PO:0025281 | PANTHER:PTHR11214 | PANTHER:PTHR11214:SF124 | UniProt:Q94A05 | UniParc:UPI00000AB5AF |
| UniProt:W8Q6I0 | SEG:seg | : | : | : | : |
Description
HPGT2Hydroxyproline O-galactosyltransferase HPGT2 [Source:UniProtKB/Swiss-Prot;Acc:Q94A05]
Coordinates
chr4:-:15516776..15519996
Molecular Weight (calculated)
39273.8 Da
IEP (calculated)
8.524
GRAVY (calculated)
-0.459
Length
345 amino acids
Sequence
(BLAST)
(BLAST)
001: MESLPTTVSG KSDRRGRFSK SQNTSKPSLI LAFFSCLAWL YVAGRLWQDA QYRAALNTVL KMNYDQRPKV LTVEDKLVVL GCKDLERRIV ETEMELAQAK
101: SQGYLKKQKS VSSSGKKMLA VIGVYTGFGS HLKRNKFRGS WMPRDDALKK LEERGVVIRF VIGRSANRGD SLDRKIDEEN RATKDFLILE NHEEAQEELP
201: KKVKFFYSAA VQNWDAEFYV KVDDNVDLDL EGMIALLESR RSQDGAYIGC MKSGDVITEE GSQWYEPEWW KFGDDKSYFR HATGSLVILS KNLAQYVNIN
301: SGLLKTYAFD DTTIGSWMIG VQATYIDDNR LCCSSTRQEK VCSMA
101: SQGYLKKQKS VSSSGKKMLA VIGVYTGFGS HLKRNKFRGS WMPRDDALKK LEERGVVIRF VIGRSANRGD SLDRKIDEEN RATKDFLILE NHEEAQEELP
201: KKVKFFYSAA VQNWDAEFYV KVDDNVDLDL EGMIALLESR RSQDGAYIGC MKSGDVITEE GSQWYEPEWW KFGDDKSYFR HATGSLVILS KNLAQYVNIN
301: SGLLKTYAFD DTTIGSWMIG VQATYIDDNR LCCSSTRQEK VCSMA
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.