Factsheet for Zm00001d045146_P002

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 1
mitochondrion 3
golgi 1
endoplasmic reticulum 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

plasma membrane: 23508561
plasma membrane: 27341663

msms PMID: 27341663 doi

P Voothuluru, JC Anderson, RE Sharp, SC Peck

Bond Life Sciences Center, University of Missouri, Columbia, MO, 65211, USA., Division of Biochemistry, University of Missouri, Columbia, MO, 65211, USA., Division of Plant Sciences, University of Missouri, Columbia, MO, 65211, USA., Interdisciplinary Plant Group, University of Missouri, Columbia, MO, 65211, USA.

msms PMID: 23508561 doi

Z Zhang, P Voothuluru, M Yamaguchi, RE Sharp, SC Peck

Division of Biochemistry, University of Missouri Columbia, MO, USA ; Christopher S. Bond Life Sciences Center, University of Missouri Columbia, MO, USA ; Interdisciplinary Plant Group, University of Missouri Columbia, MO, USA.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER87954	Sorghum	plastid	96.6	96.6
Os06t0177300-01	Rice	golgi, mitochondrion, peroxisome, plastid	89.52	89.27
Os06t0176200-01	Rice	golgi, mitochondrion, peroxisome, plastid	89.52	89.27
OQU75947	Sorghum	mitochondrion	88.67	85.52
TraesCS7B01G041500.1	Wheat	cytosol, golgi, mitochondrion, peroxisome, plastid	82.15	81.01
TraesCS7A01G139800.1	Wheat	cytosol, golgi, mitochondrion, peroxisome, plastid	80.74	80.06
TraesCS7D01G141100.1	Wheat	cytosol, golgi, mitochondrion, peroxisome, plastid	80.17	79.94
GSMUA_Achr8P24200_001	Banana	cytosol	79.32	77.78
HORVU7Hr1G028670.1	Barley	cytosol, golgi, plastid	82.44	77.39
VIT_04s0008g06480.t01	Wine grape	golgi	67.99	70.8
KRH05191	Soybean	mitochondrion, plastid	61.19	67.71
Bra007804.1-P	Field mustard	plastid	65.72	67.05
CDY11534	Canola	plastid	64.87	66.38
AT4G32120.1	Thale cress	golgi, nucleus, peroxisome	64.59	66.09
CDY58927	Canola	cytosol	64.31	65.99
CDX75222	Canola	plastid	64.59	65.52
Bra011324.1-P	Field mustard	plastid	64.59	65.52
CDX68818	Canola	plastid	64.59	65.33
AT2G25300.1	Thale cress	plastid	63.17	64.45
Solyc08g029170.2.1	Tomato	plastid	63.17	62.82
KRH15831	Soybean	mitochondrion	67.99	60.15
Zm00001d050251_P002	Maize	mitochondrion	42.78	37.19
Zm00001d032267_P003	Maize	mitochondrion	41.36	35.96
Zm00001d053825_P002	Maize	golgi	35.98	31.59
Zm00001d013804_P003	Maize	golgi, plastid, vacuole	35.69	30.29
Zm00001d016891_P001	Maize	plasma membrane	33.71	29.9
Zm00001d014361_P001	Maize	golgi	33.43	28.3
Zm00001d012234_P002	Maize	mitochondrion	32.86	27.42
Zm00001d020692_P002	Maize	golgi, mitochondrion	31.73	27.05
Zm00001d000099_P003	Maize	golgi	31.73	26.54
Zm00001d045297_P001	Maize	plastid	18.7	25.78
Zm00001d036240_P003	Maize	plastid	24.93	24.24
Zm00001d035090_P002	Maize	mitochondrion	29.18	23.04
Zm00001d009997_P001	Maize	plasma membrane	24.36	22.93

Protein Annotations

MapMan:18.1.2.1.2	ProteinID:AQL01648.1	ProteinID:AQL01652.1	InterPro:DUF4094	GO:GO:0000139	GO:GO:0003674
GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005794
GO:GO:0005975	GO:GO:0006464	GO:GO:0006486	GO:GO:0008150	GO:GO:0008152	GO:GO:0008378
GO:GO:0009058	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016740	GO:GO:0016757
GO:GO:0019538	InterPro:Glyco_trans_31	UniProt:K7V6D7	PFAM:PF01762	PFAM:PF13334	PANTHER:PTHR11214
PANTHER:PTHR11214:SF124	UniParc:UPI000220C0A6	EnsemblPlantsGene:Zm00001d045146	EnsemblPlants:Zm00001d045146_P002	EnsemblPlants:Zm00001d045146_T002	SEG:seg

Description

Hydroxyproline O-galactosyltransferase HPGT3

Coordinates

chr9:-:14229712..14234670

Molecular Weight (calculated)

39334.9 Da

IEP (calculated)

8.337

GRAVY (calculated)

-0.329

Length

353 amino acids

Sequence
(BLAST)

001: METLASAMRR ENRRSKAPPS SSASSALASG RVPLVMAFLS CLAWLYVAGR LWQDAQTRAI LSGLLEKSST SVPKVLSVED KLRNLGCKAI GRKIVEAEMD
101: LTKAKSEGYL WGNRTAAVDS DKKQQLLAVI GVYTGFGSRL KRNVFRGSWM PRGDALKKLE EKGVAIRFVI GRSANRGDSL DRNIDDENRQ TKDFLILESH
201: EEAAEELPSK AKIFFSAAVE AWDAEFYVKV EDNINLDLAG LIEMLEGRRG SQGLYMGCMK SGMVISEEGQ QWYEPEWWKF GDSKTYFRHA SGSLFILSKN
301: LARYININSA SLQSYAHDDI SVGSWMMGLN ATYVDDDRLC CSSSRQEKIC SNA

Best Arabidopsis Sequence Match ( AT4G32120.1 )
(BLAST)

001: MESLPTTVSG KSDRRGRFSK SQNTSKPSLI LAFFSCLAWL YVAGRLWQDA QYRAALNTVL KMNYDQRPKV LTVEDKLVVL GCKDLERRIV ETEMELAQAK
101: SQGYLKKQKS VSSSGKKMLA VIGVYTGFGS HLKRNKFRGS WMPRDDALKK LEERGVVIRF VIGRSANRGD SLDRKIDEEN RATKDFLILE NHEEAQEELP
201: KKVKFFYSAA VQNWDAEFYV KVDDNVDLDL EGMIALLESR RSQDGAYIGC MKSGDVITEE GSQWYEPEWW KFGDDKSYFR HATGSLVILS KNLAQYVNIN
301: SGLLKTYAFD DTTIGSWMIG VQATYIDDNR LCCSSTRQEK VCSMA

Arabidopsis Description

HPGT2Hydroxyproline O-galactosyltransferase HPGT2 [Source:UniProtKB/Swiss-Prot;Acc:Q94A05]
SUBAcon: [peroxisome,golgi,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.