CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
mitochondrion 3
golgi 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d045146_P002	Maize	plasma membrane	96.6	96.6
Os06t0177300-01	Rice	golgi, mitochondrion, peroxisome, plastid	89.8	89.55
Os06t0176200-01	Rice	golgi, mitochondrion, peroxisome, plastid	89.8	89.55
OQU75947	Sorghum	mitochondrion	90.65	87.43
TraesCS7B01G041500.1	Wheat	cytosol, golgi, mitochondrion, peroxisome, plastid	81.87	80.73
TraesCS7D01G141100.1	Wheat	cytosol, golgi, mitochondrion, peroxisome, plastid	79.89	79.66
TraesCS7A01G139800.1	Wheat	cytosol, golgi, mitochondrion, peroxisome, plastid	80.17	79.49
GSMUA_Achr8P24200_001	Banana	cytosol	79.04	77.5
HORVU7Hr1G028670.1	Barley	cytosol, golgi, plastid	82.15	77.13
VIT_04s0008g06480.t01	Wine grape	golgi	68.27	71.09
KRH05191	Soybean	mitochondrion, plastid	61.76	68.34
Bra007804.1-P	Field mustard	plastid	65.72	67.05
AT4G32120.1	Thale cress	golgi, nucleus, peroxisome	65.16	66.67
CDY11534	Canola	plastid	64.87	66.38
Bra011324.1-P	Field mustard	plastid	65.16	66.09
CDY58927	Canola	cytosol	64.31	65.99
CDX75222	Canola	plastid	64.87	65.8
CDX68818	Canola	plastid	64.87	65.62
AT2G25300.1	Thale cress	plastid	64.02	65.32
Solyc08g029170.2.1	Tomato	plastid	63.17	62.82
KRH15831	Soybean	mitochondrion	67.71	59.9
EES13774	Sorghum	mitochondrion	45.61	46.53
EES14424	Sorghum	golgi, mitochondrion	33.99	31.17
EES04570	Sorghum	golgi	35.41	31.09
OQU85173	Sorghum	golgi, nucleus	34.28	30.4
EER91307	Sorghum	golgi, peroxisome, plasma membrane	35.13	30.32
KXG22053	Sorghum	golgi, plastid	34.84	30.3
EER88815	Sorghum	golgi	34.28	30.25
KXG35748	Sorghum	golgi	32.29	28.93
KXG19339	Sorghum	golgi, mitochondrion, plastid	24.65	23.9
OQU87975	Sorghum	cytosol	33.14	23.35
EES19194	Sorghum	golgi, peroxisome, plastid	24.65	23.2

Protein Annotations

MapMan:18.1.2.1.2	EntrezGene:8076183	UniProt:C5Z5D2	InterPro:DUF4094	EnsemblPlants:EER87954	ProteinID:EER87954
ProteinID:EER87954.1	GO:GO:0000139	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005794	GO:GO:0005975	GO:GO:0006464	GO:GO:0006486
GO:GO:0008150	GO:GO:0008152	GO:GO:0008378	GO:GO:0009058	GO:GO:0009987	GO:GO:0016020
GO:GO:0016021	GO:GO:0016740	GO:GO:0016757	GO:GO:0019538	InterPro:Glyco_trans_31	PFAM:PF01762
PFAM:PF13334	PANTHER:PTHR11214	PANTHER:PTHR11214:SF124	EnsemblPlantsGene:SORBI_3010G059700	unigene:Sbi.8060	UniParc:UPI0001A89119
RefSeq:XP_002436587.1	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr10:+:4680453..4686523

Molecular Weight (calculated)

39243.7 Da

IEP (calculated)

8.095

GRAVY (calculated)

-0.315

Length

353 amino acids

Sequence
(BLAST)

001: MESLASAMRR ENRRSKAPSS SSAASTLASG RVPLVMAFLS CLAWLYVAGR LWQDAQTRAI LSGLLEKSSG SVPKVLSVED KLRNLGCKAI GSKIVEAEMD
101: LTKAKSEGYL WGNRTAAVDS DKKQQLLAVI GVYTGFGSRL KRNVFRGSWM PRGDALKKLE EKGVVIRFVI GRSANRGDSL DRNIDDENRQ TKDFLILESH
201: EEAAEELPSK AKFFFSAAVE TWDAEFYVKV EDNINLDLAG LIEMLEGRRG SQGLYMGCMK SGVVISEEGQ QWYEPDWWKF GDSKTYFRHA SGSLFILSKN
301: LARYININSA SLQSYAHDDI SVGSWMMGLN ATYVDDDRLC CSSSRQEKVC SNA

Best Arabidopsis Sequence Match ( AT4G32120.1 )
(BLAST)

001: MESLPTTVSG KSDRRGRFSK SQNTSKPSLI LAFFSCLAWL YVAGRLWQDA QYRAALNTVL KMNYDQRPKV LTVEDKLVVL GCKDLERRIV ETEMELAQAK
101: SQGYLKKQKS VSSSGKKMLA VIGVYTGFGS HLKRNKFRGS WMPRDDALKK LEERGVVIRF VIGRSANRGD SLDRKIDEEN RATKDFLILE NHEEAQEELP
201: KKVKFFYSAA VQNWDAEFYV KVDDNVDLDL EGMIALLESR RSQDGAYIGC MKSGDVITEE GSQWYEPEWW KFGDDKSYFR HATGSLVILS KNLAQYVNIN
301: SGLLKTYAFD DTTIGSWMIG VQATYIDDNR LCCSSTRQEK VCSMA

Arabidopsis Description

HPGT2Hydroxyproline O-galactosyltransferase HPGT2 [Source:UniProtKB/Swiss-Prot;Acc:Q94A05]
SUBAcon: [peroxisome,golgi,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.