CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 3
mitochondrion 1
golgi 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, golgi, plastid
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	golgi
Predotar:	plastid
PProwler:	plastid
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY11534	Canola	plastid	97.09	96.81
AT2G25300.1	Thale cress	plastid	90.7	90.17
CDX68818	Canola	plastid	83.72	82.52
CDX75222	Canola	plastid	83.43	82.47
VIT_04s0008g06480.t01	Wine grape	golgi	75.87	76.99
KRH05191	Soybean	mitochondrion, plastid	68.9	74.29
Solyc08g029170.2.1	Tomato	plastid	74.13	71.83
KRH15831	Soybean	mitochondrion	77.33	66.67
GSMUA_Achr8P24200_001	Banana	cytosol	68.9	65.83
Os06t0177300-01	Rice	golgi, mitochondrion, peroxisome, plastid	66.28	64.41
Os06t0176200-01	Rice	golgi, mitochondrion, peroxisome, plastid	66.28	64.41
Zm00001d045146_P002	Maize	plasma membrane	65.99	64.31
EER87954	Sorghum	plastid	65.99	64.31
TraesCS7D01G141100.1	Wheat	cytosol, golgi, mitochondrion, peroxisome, plastid	63.08	61.3
TraesCS7B01G041500.1	Wheat	cytosol, golgi, mitochondrion, peroxisome, plastid	63.37	60.89
TraesCS7A01G139800.1	Wheat	cytosol, golgi, mitochondrion, peroxisome, plastid	62.79	60.67
HORVU7Hr1G028670.1	Barley	cytosol, golgi, plastid	63.95	58.51
OQU75947	Sorghum	mitochondrion	62.21	58.47
CDX96213	Canola	mitochondrion	40.7	41.79
CDY49171	Canola	mitochondrion	39.53	40.6
CDY35642	Canola	mitochondrion	39.83	40.53
CDY14386	Canola	mitochondrion	39.53	40.12
CDX88390	Canola	golgi	36.63	32.98
CDX93812	Canola	golgi	37.21	32.74
CDX97981	Canola	mitochondrion	36.92	32.48
CDX87501	Canola	golgi	36.05	32.38
CDY49800	Canola	mitochondrion	36.34	31.97
CDY46836	Canola	plastid	37.79	31.94
CDY48266	Canola	golgi	37.79	31.78
CDY49507	Canola	plastid	37.79	31.71
CDY12206	Canola	golgi	37.5	31.54
CDX73278	Canola	vacuole	36.05	31.47
CDY67379	Canola	vacuole	36.05	31.47
CDX97371	Canola	cytosol, endoplasmic reticulum	36.92	31.36
CDX92791	Canola	cytosol	36.63	31.34
CDX96559	Canola	cytosol, nucleus, peroxisome	31.69	31.23
CDY04694	Canola	golgi	33.72	31.02
CDY14294	Canola	cytosol, golgi	36.34	30.79
CDY30641	Canola	golgi	33.43	30.75
CDY46675	Canola	cytosol	36.63	30.73
CDY68943	Canola	golgi	30.81	30.03
CDY38836	Canola	golgi	33.72	29.74
CDY00412	Canola	golgi	34.3	29.72
CDY11037	Canola	golgi, mitochondrion, plastid	30.81	29.53
CDY54843	Canola	golgi	37.21	29.22
CDY01303	Canola	golgi	31.4	27.98
CDY35316	Canola	plastid	25.0	23.69
CDX97620	Canola	mitochondrion	23.55	23.68
CDX77030	Canola	plastid	24.71	23.42
CDX75799	Canola	mitochondrion	23.26	23.39
CDY25866	Canola	mitochondrion	23.55	23.28
CDY55849	Canola	mitochondrion	23.55	23.28
CDY55848	Canola	mitochondrion	23.55	23.28
CDX98518	Canola	mitochondrion	23.55	23.08
CDX82456	Canola	mitochondrion	22.38	22.51
CDY42221	Canola	cytosol	8.14	21.54

Protein Annotations

MapMan:18.1.2.1.2	GO:A0A078J0V3	UniProt:A0A078J0V3	EnsemblPlants:CDY58927	ProteinID:CDY58927	ProteinID:CDY58927.1
ncoils:Coil	InterPro:DUF4094	GO:GO:0000139	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005794	GO:GO:0005975	GO:GO:0006464
GO:GO:0006486	GO:GO:0008150	GO:GO:0008152	GO:GO:0008378	GO:GO:0009058	GO:GO:0009987
GO:GO:0016020	GO:GO:0016021	GO:GO:0016740	GO:GO:0016757	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00025331001
InterPro:Glyco_trans_31	PFAM:PF01762	PFAM:PF13334	PANTHER:PTHR11214	PANTHER:PTHR11214:SF124	UniPathway:UPA00378
UniParc:UPI0004EF4A30	SEG:seg	:	:	:	:

Description

BnaC08g49080DHexosyltransferase [Source:UniProtKB/TrEMBL;Acc:A0A078J0V3]

Coordinates

chrLK033712:+:24825..27357

Molecular Weight (calculated)

38991.5 Da

IEP (calculated)

7.718

GRAVY (calculated)

-0.411

Length

344 amino acids

Sequence
(BLAST)

001: METLPTTTVS SCKSERRVRS SKYQNTSKPS VIMAFFSCVA WLYVAGRLWQ DSENRVILNN MLKKNYDQKP KVLTVDDKLM VLGCKDLERK IVETEMELTL
101: AKSQGYLKSG PSSGKSLLAV IGVYTGFGSH LRRNSFRGSW MPQGDALKKL EERGVVIRFV VGRSPNRGDS LDRKIDEEDR ARKDFLILEN HEEAQEELPK
201: KVKFFFSAAV QNWDAEFYIK VDDNIDLDLE GLIGLLESRR GQDASYIGCM KSGEVVAQEG GQWYEPEWWK FGDEKSYFRH AAGSLIILSK NLAQYININS
301: GSLKTYAFDD TSIGSWMIGV QATYIDDNRL CCSSIRQDKV CSVA

Best Arabidopsis Sequence Match ( AT2G25300.1 )
(BLAST)

001: MESLPTTVPS KSERRARSSK FSQSSSKPSV IMAFFSCVAW LYVAGRLWQD AENRVVLNNI LKKSYDQKPK VLTVDDKLMV LGCKDLERRI VETEMELTLA
101: KSQGYLKNLK SGSSSGKKLL AVIGVYSGFG SHLRRNTFRG SYMPQGDALR KLEERGIVIR FVIGRSPNRG DSLDRKIDEE NQARKDFLIL ENHEEAQEEL
201: AKKVKFFFSA AVQNWDAEFY IKVDDNIDLD LEGLIGLLES RRGQDAAYIG CMKSGEVVAE EGGKWYEPEW WKFGDEKSYF RHAAGSLLIL SKTLAQYVNI
301: NSGSLKTYAF DDTSIGSWMI GVQATYIDDN RLCCSSIRQD KVCSVA

Arabidopsis Description

HPGT3Hydroxyproline O-galactosyltransferase HPGT3 [Source:UniProtKB/Swiss-Prot;Acc:Q5XEZ1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.