CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

nucleus 1
plastid 2
mitochondrion 4
golgi 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH15831	Soybean	mitochondrion	94.98	75.94
VIT_04s0008g06480.t01	Wine grape	golgi	76.8	72.27
Bra007804.1-P	Field mustard	plastid	75.24	69.36
AT4G32120.1	Thale cress	golgi, nucleus, peroxisome	74.92	69.28
CDY11534	Canola	plastid	74.92	69.28
AT2G25300.1	Thale cress	plastid	74.92	69.08
CDY58927	Canola	cytosol	74.29	68.9
Bra011324.1-P	Field mustard	plastid	74.61	68.39
CDX68818	Canola	plastid	74.61	68.19
CDX75222	Canola	plastid	74.29	68.1
Solyc08g029170.2.1	Tomato	plastid	72.73	65.35
EER87954	Sorghum	plastid	68.34	61.76
Zm00001d045146_P002	Maize	plasma membrane	67.71	61.19
Os06t0176200-01	Rice	golgi, mitochondrion, peroxisome, plastid	67.4	60.73
Os06t0177300-01	Rice	golgi, mitochondrion, peroxisome, plastid	67.4	60.73
GSMUA_Achr8P24200_001	Banana	cytosol	68.34	60.56
TraesCS7D01G141100.1	Wheat	cytosol, golgi, mitochondrion, peroxisome, plastid	63.64	57.34
TraesCS7A01G139800.1	Wheat	cytosol, golgi, mitochondrion, peroxisome, plastid	63.64	57.02
TraesCS7B01G041500.1	Wheat	cytosol, golgi, mitochondrion, peroxisome, plastid	63.32	56.42
OQU75947	Sorghum	mitochondrion	63.64	55.46
HORVU7Hr1G028670.1	Barley	cytosol, golgi, plastid	63.64	53.99
KRH27862	Soybean	mitochondrion	42.01	39.07
KRH53422	Soybean	mitochondrion	41.69	38.78
KRH64518	Soybean	mitochondrion	41.07	38.19
KRH26781	Soybean	golgi, plasma membrane	38.24	29.98
KRH25371	Soybean	golgi, mitochondrion	37.93	29.8
KRH22570	Soybean	golgi	37.93	29.73
KRH56140	Soybean	golgi, mitochondrion	37.93	29.73
KRH02065	Soybean	golgi, mitochondrion	33.86	28.88
KRH18826	Soybean	endoplasmic reticulum	35.74	28.72
KRH16620	Soybean	mitochondrion	35.74	28.72
KRH51094	Soybean	cytosol	31.03	28.7
KRH23776	Soybean	golgi, vacuole	33.54	28.31
KRH40026	Soybean	golgi	33.86	28.27
KRH53153	Soybean	vacuole	34.8	28.17
KRH64756	Soybean	golgi	34.8	27.96
KRH21986	Soybean	mitochondrion	22.57	21.43
KRH55102	Soybean	plastid	21.63	20.41
KRH26222	Soybean	plastid	21.32	20.12

Protein Annotations

MapMan:35.1	UniProt:A0A0R0FGB5	EMBL:ACUP02010687	EMBL:ACUP02010688	ncoils:Coil	InterPro:DUF4094
EnsemblPlantsGene:GLYMA_17G212500	GO:GO:0000139	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005794	GO:GO:0005975	GO:GO:0006464	GO:GO:0006486
GO:GO:0008150	GO:GO:0008152	GO:GO:0008378	GO:GO:0009058	GO:GO:0009987	GO:GO:0016020
GO:GO:0016021	GO:GO:0016740	GO:GO:0016757	GO:GO:0019538	InterPro:Glyco_trans_31	EnsemblPlants:KRH05191
ProteinID:KRH05191	ProteinID:KRH05191.1	PFAM:PF01762	PFAM:PF13334	PANTHER:PTHR11214	PANTHER:PTHR11214:SF124
UniParc:UPI0006EDD0CE	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr17:+:35167055..35173962

Molecular Weight (calculated)

35922.9 Da

IEP (calculated)

8.164

GRAVY (calculated)

-0.394

Length

319 amino acids

Sequence
(BLAST)

001: MESLPTTKRG GARSKPVQTS KSSLVMAFFS CVAWLYVAGR LWQDAENRNL LASLLKKNSA QRPKVLTVED KLMVLGCRDL ERRIVEAEME LSLAKSQGYL
101: KGQGQKSSSS DPRFLAVIGV YTGFGSKLKR NIFRGSWMPR GDALKKLEER GVVIRFVIGR SANRGDSLDR NIDEENRTTK DFLILNWDAD FYVKVDDGID
201: IDLEGLIELL DRRRGQDGAY VGCMKSGEVI SEEGKPWYEP DWWKFGDEKS YFRHAAGSLV IISKNLAQYI NINSVSLKTY GYDDTSLGSW MMGIQATYID
301: DSRLCCSSIR QDVSSEIEG

Best Arabidopsis Sequence Match ( AT4G32120.1 )
(BLAST)

001: MESLPTTVSG KSDRRGRFSK SQNTSKPSLI LAFFSCLAWL YVAGRLWQDA QYRAALNTVL KMNYDQRPKV LTVEDKLVVL GCKDLERRIV ETEMELAQAK
101: SQGYLKKQKS VSSSGKKMLA VIGVYTGFGS HLKRNKFRGS WMPRDDALKK LEERGVVIRF VIGRSANRGD SLDRKIDEEN RATKDFLILE NHEEAQEELP
201: KKVKFFYSAA VQNWDAEFYV KVDDNVDLDL EGMIALLESR RSQDGAYIGC MKSGDVITEE GSQWYEPEWW KFGDDKSYFR HATGSLVILS KNLAQYVNIN
301: SGLLKTYAFD DTTIGSWMIG VQATYIDDNR LCCSSTRQEK VCSMA

Arabidopsis Description

HPGT2Hydroxyproline O-galactosyltransferase HPGT2 [Source:UniProtKB/Swiss-Prot;Acc:Q94A05]
SUBAcon: [peroxisome,golgi,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.