Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 2
- golgi 4
- plastid 1
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
endoplasmic reticulum:
28499913
|
msms PMID:
28499913
doi
Department of Life Science and Informatics, Maebashi Institute of Technology, Maebashi 371-0816, Japan. Electronic address: ksakata@maebashi-it.ac.jp., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan. Electronic address: komatsu.setsuko.fu@u.tsukuba.ac.jp., King Abdullah University of Science and Technology (KAUST), Computational Bioscience Research Center (CBRC), Thuwal 23955-6900, Saudi Arabia.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH16620 | Soybean | mitochondrion | 94.96 | 94.96 |
| KRH64756 | Soybean | golgi | 86.15 | 86.15 |
| KRH53153 | Soybean | vacuole | 84.63 | 85.28 |
| PGSC0003DMT400071429 | Potato | golgi | 80.1 | 80.3 |
| Solyc11g013490.1.1 | Tomato | golgi | 80.1 | 80.3 |
| VIT_18s0001g04150.t01 | Wine grape | golgi | 78.09 | 78.09 |
| Zm00001d016891_P001 | Maize | plasma membrane | 75.06 | 74.87 |
| OQU85173 | Sorghum | golgi, nucleus | 74.31 | 74.12 |
| AT1G77810.1 | Thale cress | golgi | 72.04 | 73.9 |
| GSMUA_Achr5P23050_001 | Banana | cytosol, golgi, mitochondrion, plastid | 73.8 | 73.25 |
| TraesCS6D01G187900.1 | Wheat | golgi | 72.29 | 72.29 |
| TraesCS6B01G227300.1 | Wheat | golgi | 72.04 | 72.04 |
| TraesCS6A01G201400.2 | Wheat | golgi | 72.04 | 72.04 |
| Os02t0566800-01 | Rice | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole | 70.28 | 71.72 |
| CDX88390 | Canola | golgi | 68.51 | 71.2 |
| Bra015654.1-P | Field mustard | golgi | 68.26 | 70.76 |
| CDX87501 | Canola | golgi | 68.26 | 70.76 |
| GSMUA_Achr8P23200_001 | Banana | golgi | 75.06 | 69.79 |
| Os09t0452900-01 | Rice | golgi | 68.26 | 68.96 |
| CDX96559 | Canola | cytosol, nucleus, peroxisome | 59.7 | 67.91 |
| TraesCS5B01G233700.1 | Wheat | golgi | 67.25 | 67.59 |
| TraesCS5D01G242400.1 | Wheat | golgi | 67.25 | 67.59 |
| Zm00001d000099_P003 | Maize | golgi | 71.79 | 67.54 |
| Bra031357.1-P | Field mustard | cytosol | 56.42 | 67.07 |
| KXG35748 | Sorghum | golgi | 66.0 | 66.5 |
| CDY04694 | Canola | golgi | 60.45 | 64.17 |
| AT1G22015.1 | Thale cress | golgi | 64.23 | 64.07 |
| Zm00001d020692_P002 | Maize | golgi, mitochondrion | 66.5 | 63.77 |
| CDY30641 | Canola | golgi | 59.95 | 63.64 |
| KRH56140 | Soybean | golgi, mitochondrion | 64.99 | 63.39 |
| KRH23776 | Soybean | golgi, vacuole | 60.2 | 63.23 |
| KRH40026 | Soybean | golgi | 60.71 | 63.09 |
| Bra016393.1-P | Field mustard | golgi | 61.96 | 63.08 |
| CDY38836 | Canola | golgi | 61.96 | 63.08 |
| TraesCS5A01G235300.4 | Wheat | golgi | 67.51 | 63.06 |
| KRH25371 | Soybean | golgi, mitochondrion | 64.48 | 63.05 |
| KRH51094 | Soybean | cytosol | 54.41 | 62.61 |
| CDY00412 | Canola | golgi | 61.46 | 61.46 |
| KRH26781 | Soybean | golgi, plasma membrane | 62.97 | 61.43 |
| HORVU6Hr1G052140.8 | Barley | plastid | 72.8 | 61.36 |
| KRH02065 | Soybean | golgi, mitochondrion | 57.68 | 61.23 |
| Bra012302.1-P | Field mustard | golgi | 60.96 | 60.96 |
| KRH22570 | Soybean | golgi | 62.47 | 60.93 |
| CDY01303 | Canola | golgi | 56.68 | 58.29 |
| HORVU5Hr1G067750.1 | Barley | plastid | 67.0 | 54.85 |
| KRH27862 | Soybean | mitochondrion | 34.76 | 40.23 |
| KRH53422 | Soybean | mitochondrion | 34.51 | 39.94 |
| KRH64518 | Soybean | mitochondrion | 33.75 | 39.07 |
| KRH05191 | Soybean | mitochondrion, plastid | 28.72 | 35.74 |
| KRH15831 | Soybean | mitochondrion | 33.0 | 32.83 |
| KRH26222 | Soybean | plastid | 27.2 | 31.95 |
| KRH55102 | Soybean | plastid | 27.2 | 31.95 |
| KRH21986 | Soybean | mitochondrion | 26.95 | 31.85 |
Protein Annotations
| EntrezGene:100793793 | MapMan:21.4.1.1.5.3 | Gene3D:3.90.550.50 | EMBL:ACUP02008135 | ncoils:Coil | InterPro:DUF4094 |
| EnsemblPlantsGene:GLYMA_13G084600 | GO:GO:0000139 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005794 | GO:GO:0005975 | GO:GO:0006464 | GO:GO:0006486 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008378 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0016740 | GO:GO:0016757 | GO:GO:0019538 | InterPro:Glyco_trans_31 | UniProt:I1LW28 |
| EnsemblPlants:KRH18826 | ProteinID:KRH18826 | ProteinID:KRH18826.1 | PFAM:PF01762 | PFAM:PF13334 | PANTHER:PTHR11214 |
| PANTHER:PTHR11214:SF74 | TMHMM:TMhelix | UniParc:UPI000233B50C | : | : | : |
Description
hypothetical protein
Coordinates
chr13:-:19574539..19578359
Molecular Weight (calculated)
44642.4 Da
IEP (calculated)
8.325
GRAVY (calculated)
-0.332
Length
397 amino acids
Sequence
(BLAST)
(BLAST)
001: MKIRSSKKIS AKWVPVFSVF SFLIGMLITT RIWEPPESNG VFLSNHRHEQ ELQVVSGDCA PKKPVQDNDV MNKVYKTHGA IQSLDKQVSM LQMELAAARS
101: TREHKISDGS ANTLASGVST EGPPRKKVFV VIGINTAFSS RKRRDSVRET WMPQGEQLLQ LEREKGIVIR FMIGHSATSN SILDRAIDSE EAQHKDFLRL
201: EHVEGYHELS AKTKIFFSTA VAKWDADFYV KVDDDVHVNL GVLATTLARH RSKPRIYIGC MKSGPVLSRR DVKYHEPEFW KFGEEGNKYF RHATGQIYAI
301: SKDLATYISI NQPILHKYAN EDVSLGAWFI GLEVEHIDDR SMCCGTPPDC EWKAQAGNIC VASFDWSCSG ICKSVEKIKY VHSKCGEGDG AVWSALV
101: TREHKISDGS ANTLASGVST EGPPRKKVFV VIGINTAFSS RKRRDSVRET WMPQGEQLLQ LEREKGIVIR FMIGHSATSN SILDRAIDSE EAQHKDFLRL
201: EHVEGYHELS AKTKIFFSTA VAKWDADFYV KVDDDVHVNL GVLATTLARH RSKPRIYIGC MKSGPVLSRR DVKYHEPEFW KFGEEGNKYF RHATGQIYAI
301: SKDLATYISI NQPILHKYAN EDVSLGAWFI GLEVEHIDDR SMCCGTPPDC EWKAQAGNIC VASFDWSCSG ICKSVEKIKY VHSKCGEGDG AVWSALV
001: MKHKVSKRVI SLKWVPFLCI SFFALGAIFT SRSWEPSSDS GSQLISQHHR DHELQIVSDD CAHNKKATQE KDVTGEVLRT HEAIQSLDKS VSTLSSTRSS
101: QEMVDGSETN PRKKVFMVMG INTAFSSRKR RDSVRETWMP QGEKLERLEQ EKGIVIKFMI GHSATSNSIL DRAIDSEDAQ HKDFLRLEHV EGYHELSAKT
201: KIFFSTAVAK WDAEFYIKVD DDVHVNLGML ASTLARHRSK PRVYIGCMKS GPVLAQKTVK YHEPEYWKFG EDGNKYFRHA TGQIYAISKD LANYISINQP
301: ILHKYANEDV SLGSWFIGLE VEHIDDRNFC CGTPPDCRWK AEAGDVCVAS FEWSCSGICK SVERMKIVHE VCSEGEGAVW NTLL
101: QEMVDGSETN PRKKVFMVMG INTAFSSRKR RDSVRETWMP QGEKLERLEQ EKGIVIKFMI GHSATSNSIL DRAIDSEDAQ HKDFLRLEHV EGYHELSAKT
201: KIFFSTAVAK WDAEFYIKVD DDVHVNLGML ASTLARHRSK PRVYIGCMKS GPVLAQKTVK YHEPEYWKFG EDGNKYFRHA TGQIYAISKD LANYISINQP
301: ILHKYANEDV SLGSWFIGLE VEHIDDRNFC CGTPPDCRWK AEAGDVCVAS FEWSCSGICK SVERMKIVHE VCSEGEGAVW NTLL
Arabidopsis Description
Hexosyltransferase [Source:UniProtKB/TrEMBL;Acc:A0A178WEM8]
SUBAcon: [golgi]
SUBAcon: [golgi]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.