Factsheet for TraesCS6B01G227300.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

mitochondrion 3
golgi 3
extracellular 1
endoplasmic reticulum 1
vacuole 2
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	mitochondrion, secretory
iPSORT:	mitochondrion
MultiLoc:	golgi
Predotar:	secretory
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	vacuole
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G187900.1	Wheat	golgi	98.99	98.99
TraesCS6A01G201400.2	Wheat	golgi	98.74	98.74
OQU85173	Sorghum	golgi, nucleus	91.94	91.71
Zm00001d016891_P001	Maize	plasma membrane	91.44	91.21
Os02t0566800-01	Rice	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole	85.39	87.15
Zm00001d000099_P003	Maize	golgi	88.41	83.18
HORVU6Hr1G052140.8	Barley	plastid	96.47	81.32
GSMUA_Achr5P23050_001	Banana	cytosol, golgi, mitochondrion, plastid	77.08	76.5
TraesCS5B01G233700.1	Wheat	golgi	72.29	72.66
VIT_18s0001g04150.t01	Wine grape	golgi	72.54	72.54
PGSC0003DMT400071429	Potato	golgi	72.04	72.22
Solyc11g013490.1.1	Tomato	golgi	72.04	72.22
KRH18826	Soybean	endoplasmic reticulum	72.04	72.04
KRH64756	Soybean	golgi	71.79	71.79
VIT_07s0031g03090.t01	Wine grape	golgi	71.79	71.79
GSMUA_Achr8P23200_001	Banana	golgi	77.08	71.66
KRH53153	Soybean	vacuole	71.03	71.57
KRH16620	Soybean	mitochondrion	71.54	71.54
AT1G77810.1	Thale cress	golgi	69.02	70.8
PGSC0003DMT400075526	Potato	cytosol	55.42	67.28
CDX88390	Canola	golgi	64.74	67.28
Bra015654.1-P	Field mustard	golgi	64.74	67.1
CDX87501	Canola	golgi	64.74	67.1
Solyc12g096440.1.1	Tomato	cytosol	42.57	64.75
PGSC0003DMT400075963	Potato	golgi	63.98	64.14
Solyc08g069060.2.1	Tomato	nucleus	63.98	64.14
Bra031357.1-P	Field mustard	cytosol	53.65	63.77
CDX96559	Canola	cytosol, nucleus, peroxisome	55.92	63.61
CDY04694	Canola	golgi	58.44	62.03
CDY30641	Canola	golgi	58.19	61.76
CDY38836	Canola	golgi	58.94	60.0
Bra016393.1-P	Field mustard	golgi	58.94	60.0
TraesCS7B01G241500.2	Wheat	cytosol, golgi, mitochondrion, nucleus	60.2	59.75
AT1G22015.1	Thale cress	golgi	59.19	59.05
CDY00412	Canola	golgi	58.94	58.94
Bra012302.1-P	Field mustard	golgi	58.69	58.69
TraesCS1B01G278100.1	Wheat	golgi	58.19	57.61
TraesCS6B01G166400.1	Wheat	golgi	57.68	57.25
CDY01303	Canola	golgi	54.16	55.7
TraesCS7B01G358000.2	Wheat	golgi	56.68	55.01
TraesCS3B01G419800.1	Wheat	golgi	55.42	54.19
TraesCS7B01G217700.1	Wheat	extracellular, golgi, peroxisome	48.36	47.06
TraesCS7B01G185900.1	Wheat	mitochondrion	32.49	37.39
PGSC0003DMT400051332	Potato	extracellular, plasma membrane, vacuole	19.14	33.63
TraesCS7B01G041500.1	Wheat	cytosol, golgi, mitochondrion, peroxisome, plastid	29.47	32.68
TraesCS7B01G013300.1	Wheat	plastid	27.46	29.46
TraesCS1B01G144600.1	Wheat	cytosol, golgi, peroxisome	26.45	27.93
PGSC0003DMT400050795	Potato	vacuole	14.61	25.33

Protein Annotations

MapMan:21.4.1.1.5.3	Gene3D:3.90.550.50	InterPro:DUF4094	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0005975	GO:GO:0006464	GO:GO:0006486	GO:GO:0008150	GO:GO:0008152	GO:GO:0008378
GO:GO:0009058	GO:GO:0009987	GO:GO:0016020	GO:GO:0016740	GO:GO:0019538	InterPro:Glyco_trans_31
PFAM:PF01762	PFAM:PF13334	PANTHER:PTHR11214	PANTHER:PTHR11214:SF74	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS6B01G227300
EnsemblPlants:TraesCS6B01G227300.1	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr6B:-:352064806..352095106

Molecular Weight (calculated)

44803.3 Da

IEP (calculated)

7.792

GRAVY (calculated)

-0.442

Length

397 amino acids

Sequence
(BLAST)

001: MKGKGGALDR RSSARWRLLL LCAFSFGLGM LFTNRFWTAP STNNHIMSQH RRQDQELQLV SEDCNTKRKH GEHKDIMGEV TRTHEAIQLL DKSISTLQME
101: LAAKRSTLEL VRSGVPVTSE TSQPRKKAFV VVGVNTAFSS RKRRDSVRET WMPQGEKLLQ LEEQKGIVIR FTIGHSATSN SILDKAIDAE DEQHHDFLRL
201: DHVEGYHELS AKTKIFFSTS VGIWDADFFV KVDDDVHVNL GMLATTLARH KAKPRTYIGC MKSGPVLADK NLKYHEPEAW KFGEDGNKYF RHATGQIYAI
301: SKDLATYISI NQPILHKYAN EDVSLGSWFI GLEVNHIDER NMCCGTPPDC EWKGQAGNIC VASFDWSCSG ICKSVERLKD VHARCGEGDS SVWSDLI

Best Arabidopsis Sequence Match ( AT1G77810.2 )
(BLAST)

001: MKHKVSKRVI SLKWVPFLCI SFFALGAIFT SRSWEPSSDS GSQLISQHHR DHELQIVSDD CAHNKKATQE KDVTGEVLRT HEAIQSLDKS VSTLSSTRSS
101: QEMVDGSETN PRKKVFMVMG INTAFSSRKR RDSVRETWMP QGEKLERLEQ EKGIVIKFMI GHSATSNSIL DRAIDSEDAQ HKDFLRLEHV EGYHELSAKT
201: KIFFSTAVAK WDAEFYIKVD DDVHVNLGML ASTLARHRSK PRVYIGCMKS GPVLAQKTVK YHEPEYWKFG EDGNKYFRHA TGQIYAISKD LANYISINQP
301: ILHKYANEDV SLGSWFIGLE VEHIDDRNFC CGTPPDCRWK AEAGDVCVAS FEWSCSGICK SVERMKIVHE VCSEGEGAVW NTLL

Arabidopsis Description

Hexosyltransferase [Source:UniProtKB/TrEMBL;Acc:A0A178WEM8]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.