Factsheet for Solyc08g069060.2.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 2
extracellular 4
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
iPSORT:	secretory
MultiLoc:	golgi
Plant-mPloc:	plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	mitochondrion
YLoc:	golgi

nucleus: 28394025

msms PMID: 28394025 doi

AJM Howden, R Stam, V Martinez Heredia, GB Motion, S Ten Have, K Hodge, TM Marques Monteiro Amaro, E Huitema

Cell and Molecular Sciences, JHI, Invergowrie, Dundee, DD2 5DA, UK., Division of Plant Science, School of Life Sciences, University of Dundee at the James Hutton Institute (JHI), Invergowrie, Dundee, DD2 5DA, UK., Dundee Effector Consortium, JHI, Invergowrie, Dundee, DD2 5DA, UK., Section of Population Genetics, Technische Universität München, 85354, Freising, Germany., Wellcome Trust Centre for Gene Regulation and Expression, School of Life Sciences, University of Dundee, Dow Street, Dundee, DD1 5EH, UK.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400075963	Potato	golgi	97.22	97.22
Solyc12g096440.1.1	Tomato	cytosol	49.49	75.1
VIT_07s0031g03090.t01	Wine grape	golgi	70.45	70.28
Solyc11g013490.1.1	Tomato	golgi	68.94	68.94
Zm00001d016891_P001	Maize	plasma membrane	66.41	66.08
OQU85173	Sorghum	golgi, nucleus	66.16	65.83
GSMUA_Achr5P23050_001	Banana	cytosol, golgi, mitochondrion, plastid	65.66	65.0
Os02t0566800-01	Rice	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole	63.38	64.52
TraesCS6D01G187900.1	Wheat	golgi	64.65	64.48
Os09t0452900-01	Rice	golgi	63.89	64.38
TraesCS6A01G201400.2	Wheat	golgi	64.39	64.23
TraesCS6B01G227300.1	Wheat	golgi	64.14	63.98
Solyc08g083340.1.1	Tomato	cytosol	19.95	63.71
TraesCS5B01G233700.1	Wheat	golgi	62.12	62.28
TraesCS5D01G242400.1	Wheat	golgi	61.87	62.03
KXG35748	Sorghum	golgi	61.11	61.42
GSMUA_Achr8P23200_001	Banana	golgi	65.15	60.42
Zm00001d000099_P003	Maize	golgi	64.14	60.19
Solyc07g052320.2.1	Tomato	mitochondrion, plastid	61.36	59.56
Solyc12g005880.1.1	Tomato	plastid	57.83	57.97
Solyc07g064670.2.1	Tomato	nucleus	59.6	57.84
Zm00001d020692_P002	Maize	golgi, mitochondrion	60.35	57.73
Solyc11g042810.1.1	Tomato	golgi	57.32	57.61
TraesCS5A01G235300.4	Wheat	golgi	61.36	57.18
HORVU6Hr1G052140.8	Barley	plastid	65.4	54.99
HORVU5Hr1G067750.1	Barley	plastid	61.87	50.52
PGSC0003DMT400051332	Potato	extracellular, plasma membrane, vacuole	23.74	41.59
Solyc08g081920.2.1	Tomato	nucleus	34.09	39.36
Solyc10g007200.2.1	Tomato	golgi, mitochondrion	29.29	33.33
Solyc08g029170.2.1	Tomato	plastid	29.55	32.96
PGSC0003DMT400050795	Potato	vacuole	18.94	32.75
Solyc07g062590.2.1	Tomato	plastid	27.78	31.34

Protein Annotations

MapMan:21.4.1.1.5.3	Gene3D:3.90.550.50	InterPro:DUF4094	GO:GO:0000139	GO:GO:0003674	GO:GO:0003824
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005794	GO:GO:0005975
GO:GO:0006464	GO:GO:0006486	GO:GO:0008150	GO:GO:0008152	GO:GO:0008378	GO:GO:0009058
GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016740	GO:GO:0016757	GO:GO:0019538
InterPro:Glyco_trans_31	UniProt:K4CMC6	PFAM:PF01762	PFAM:PF13334	PANTHER:PTHR11214	PANTHER:PTHR11214:SF221
EnsemblPlantsGene:Solyc08g069060.2	EnsemblPlants:Solyc08g069060.2.1	TMHMM:TMhelix	UniParc:UPI000276ACC8	:	:

Description

Hexosyltransferase [Source:UniProtKB/TrEMBL;Acc:K4CMC6]

Coordinates

chr8:+:58144948..58149868

Molecular Weight (calculated)

44727.5 Da

IEP (calculated)

8.542

GRAVY (calculated)

-0.397

Length

396 amino acids

Sequence
(BLAST)

001: MKNRNRAKIS TKWIAILCIF SFALGMLFSN RVWTPPESDG RNIFGRRQTQ ERVLPSVSDD CETKNSQKEE MMGEFNKAQV AIQSLDDSIA KIQSELPSTK
101: DPLIPRITEE VPSLRTDSGG SGTRKKTFMV IGINTAFSSR KRRDSIRETW MPQGTKLHRL EQEKGIIVRF MIGHSAISNS ILDRAIDSED AQHNDILRLD
201: HVEGYHELTA KTKAFFSLAV AKWDAEFYVK IDDDVHVNLG TLAATLARHR LKPRVYIGCM KSGPVLYQKS VKYHEPEFWK FGETGNKYFR HATGQIYAIS
301: KELATYVANN RPILHKYANE DVSLGAWLIG LEVEHIDDRN LCCGTPPECE WKAQAGNVCV ASFDWSCSGI CKSVERIKQV HAKCSESPAT LWGALI

Best Arabidopsis Sequence Match ( AT1G77810.2 )
(BLAST)

001: MKHKVSKRVI SLKWVPFLCI SFFALGAIFT SRSWEPSSDS GSQLISQHHR DHELQIVSDD CAHNKKATQE KDVTGEVLRT HEAIQSLDKS VSTLSSTRSS
101: QEMVDGSETN PRKKVFMVMG INTAFSSRKR RDSVRETWMP QGEKLERLEQ EKGIVIKFMI GHSATSNSIL DRAIDSEDAQ HKDFLRLEHV EGYHELSAKT
201: KIFFSTAVAK WDAEFYIKVD DDVHVNLGML ASTLARHRSK PRVYIGCMKS GPVLAQKTVK YHEPEYWKFG EDGNKYFRHA TGQIYAISKD LANYISINQP
301: ILHKYANEDV SLGSWFIGLE VEHIDDRNFC CGTPPDCRWK AEAGDVCVAS FEWSCSGICK SVERMKIVHE VCSEGEGAVW NTLL

Arabidopsis Description

Hexosyltransferase [Source:UniProtKB/TrEMBL;Acc:A0A178WEM8]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.