Factsheet for Solyc12g005880.1.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
mitochondrion 3
golgi 1
plasma membrane 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400022537	Potato	plastid	95.95	95.47
Solyc07g052320.2.1	Tomato	mitochondrion, plastid	83.8	81.13
VIT_12s0059g00640.t01	Wine grape	golgi	80.0	77.64
KRH26781	Soybean	golgi, plasma membrane	77.72	75.43
KRH22570	Soybean	golgi	77.47	75.18
KRH56140	Soybean	golgi, mitochondrion	75.7	73.46
CDY49507	Canola	plastid	75.7	72.93
KRH25371	Soybean	golgi, mitochondrion	74.94	72.91
AT2G32430.1	Thale cress	golgi	75.19	72.62
CDY46836	Canola	plastid	74.68	72.48
Solyc07g064670.2.1	Tomato	nucleus	74.68	72.3
AT1G05170.2	Thale cress	cytosol, golgi	74.43	72.24
CDY48266	Canola	golgi	74.43	71.88
Bra005595.1-P	Field mustard	golgi	74.43	71.88
CDY12206	Canola	golgi	73.67	71.15
GSMUA_Achr4P33450_001	Banana	golgi	72.41	70.97
Os03t0577500-01	Rice	golgi, peroxisome, plastid	71.39	69.46
GSMUA_Achr7P00260_001	Banana	golgi	71.39	69.46
EER91307	Sorghum	golgi, peroxisome, plasma membrane	71.9	69.44
GSMUA_Achr4P23710_001	Banana	golgi	72.15	69.01
TraesCS7D01G339200.1	Wheat	cytosol, golgi, mitochondrion, plastid	69.37	68.5
HORVU7Hr1G081720.2	Barley	cytosol	69.11	68.42
TraesCS7B01G241500.2	Wheat	cytosol, golgi, mitochondrion, nucleus	69.11	68.25
TraesCS7A01G330900.1	Wheat	cytosol, golgi, mitochondrion, plastid	68.86	68.0
Bra015395.1-P	Field mustard	plastid	73.16	67.84
Zm00001d013804_P003	Maize	golgi, plastid, vacuole	69.62	66.11
Solyc12g096440.1.1	Tomato	cytosol	40.51	61.3
Solyc11g013490.1.1	Tomato	golgi	59.24	59.09
Solyc08g083340.1.1	Tomato	cytosol	18.48	58.87
Solyc08g069060.2.1	Tomato	nucleus	57.97	57.83
Solyc11g042810.1.1	Tomato	golgi	54.43	54.57
Solyc08g081920.2.1	Tomato	nucleus	35.19	40.52
Solyc08g029170.2.1	Tomato	plastid	30.38	33.8
Solyc10g007200.2.1	Tomato	golgi, mitochondrion	27.09	30.75
Solyc07g062590.2.1	Tomato	plastid	26.84	30.2

Protein Annotations

MapMan:21.4.1.1.5.3	Gene3D:3.90.550.50	InterPro:DUF4094	GO:GO:0000139	GO:GO:0003674	GO:GO:0003824
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005794	GO:GO:0005975
GO:GO:0006464	GO:GO:0006486	GO:GO:0008150	GO:GO:0008152	GO:GO:0008378	GO:GO:0009058
GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016740	GO:GO:0016757	GO:GO:0019538
InterPro:Glyco_trans_31	UniProt:K4DBC6	PFAM:PF01762	PFAM:PF13334	PANTHER:PTHR11214	PANTHER:PTHR11214:SF208
EnsemblPlantsGene:Solyc12g005880.1	EnsemblPlants:Solyc12g005880.1.1	TMHMM:TMhelix	UniParc:UPI000276A4A9	SEG:seg	:

Description

Hexosyltransferase [Source:UniProtKB/TrEMBL;Acc:K4DBC6]

Coordinates

chr12:+:514570..517761

Molecular Weight (calculated)

45100.0 Da

IEP (calculated)

8.820

GRAVY (calculated)

-0.395

Length

395 amino acids

Sequence
(BLAST)

001: MYFKNRGATE RPSRSVVSKK WSLFLCLGSF CAGMFFTNRM WIVSETKEGI TRTTTVEAER LKLISENCIT KFQQDVKLVS KDNFGILDKT ISNLEIELAE
101: AKAAHESILS GVPISEEIEK GESRRRRKYF MVVGINTAFS SRKRRDSVRA TWMPQGEKRR KLEEEKGIII RFVIGHSATL GGILDKAIEA EDKKHGDFLR
201: LDHIEGYLEL SAKTKTYFAT AVNLWDAEYY IKVDDDVHVN IATLAETLVR HSKKPRIYIG CMKSGPVLSR KGVRYHEPEY WKFGDKYFRH ATGQIYAISK
301: DLATYISANQ HVLHKYTNED VSLGAWFIGL DVQHIDDRRL CCGTPPDCEW KAQAGNVCVA SFDWTCSGIC RSVDRMKEVH RHCGEGENAL WKAAF

Best Arabidopsis Sequence Match ( AT1G05170.2 )
(BLAST)

001: MSAKIKGEYS SRSFVSRKWT ILLCLGSFCV GMFFTNRMWN IPESKGMSHP SVTEAERLKL VSEGCNPKAL YQKEVKRDPQ ALFGEVANTH IALQTLDKTI
101: SSLEMELAAA RSVQESLQNG APLSDDMGKK QPQEQRRFLM VVGINTAFSS RKRRDSIRAT WMPQGEKRKR LEEEKGIIIR FVIGHSATTG GILDRAIEAE
201: DRKHGDFLRL DHVEGYLELS GKTKTYFSTA FSMWDADFYV KVDDDVHVNI ATLGETLVRH RKKPRVYIGC MKSGPVLSQK GVRYHEPEYW KFGENGNKYF
301: RHATGQLYAI SRDLASYISI NQHVLHKYAN EDVSLGAWFI GIDVKHIDDR RLCCGTPPDC EWKAQAGNIC VASFDWSCSG ICRSADRIKE VHRRCGEGEK
401: ALWSATF

Arabidopsis Description

B3GALT2Hexosyltransferase (Fragment) [Source:UniProtKB/TrEMBL;Acc:W8Q3U9]
SUBAcon: [golgi,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.