Factsheet for PGSC0003DMT400022537

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
plastid 3
mitochondrion 3
golgi 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc12g005880.1.1	Tomato	plastid	95.47	95.95
PGSC0003DMT400074517	Potato	cytosol, golgi, mitochondrion, vacuole	83.88	81.62
VIT_12s0059g00640.t01	Wine grape	golgi	79.35	77.4
KRH26781	Soybean	golgi, plasma membrane	78.34	76.41
KRH22570	Soybean	golgi	77.58	75.68
KRH56140	Soybean	golgi, mitochondrion	76.83	74.94
KRH25371	Soybean	golgi, mitochondrion	76.07	74.38
CDY49507	Canola	plastid	75.06	72.68
PGSC0003DMT400057471	Potato	golgi	74.31	72.3
AT2G32430.1	Thale cress	golgi	74.31	72.13
CDY46836	Canola	plastid	73.8	71.99
AT1G05170.2	Thale cress	cytosol, golgi	73.8	71.99
Bra005595.1-P	Field mustard	golgi	73.8	71.64
CDY48266	Canola	golgi	73.8	71.64
GSMUA_Achr4P33450_001	Banana	golgi	72.54	71.46
CDY12206	Canola	golgi	73.05	70.9
EER91307	Sorghum	golgi, peroxisome, plasma membrane	72.54	70.42
GSMUA_Achr7P00260_001	Banana	golgi	71.28	69.7
GSMUA_Achr4P23710_001	Banana	golgi	72.04	69.25
PGSC0003DMT400071658	Potato	golgi	68.01	69.23
Os03t0577500-01	Rice	golgi, peroxisome, plastid	70.78	69.21
TraesCS7D01G339200.1	Wheat	cytosol, golgi, mitochondrion, plastid	69.02	68.5
TraesCS7B01G241500.2	Wheat	cytosol, golgi, mitochondrion, nucleus	69.02	68.5
HORVU7Hr1G081720.2	Barley	cytosol	68.77	68.42
TraesCS7A01G330900.1	Wheat	cytosol, golgi, mitochondrion, plastid	68.51	68.0
Bra015395.1-P	Field mustard	plastid	72.54	67.61
Zm00001d013804_P003	Maize	golgi, plastid, vacuole	69.77	66.59
PGSC0003DMT400075526	Potato	cytosol	50.38	61.16
PGSC0003DMT400071429	Potato	golgi	58.94	59.09
PGSC0003DMT400075963	Potato	golgi	57.18	57.32
PGSC0003DMT400082760	Potato	golgi	55.67	55.53
PGSC0003DMT400032067	Potato	cytosol, mitochondrion	33.5	42.49
PGSC0003DMT400023412	Potato	mitochondrion	33.0	37.32
PGSC0003DMT400051332	Potato	extracellular, plasma membrane, vacuole	18.64	32.74
PGSC0003DMT400054913	Potato	golgi, mitochondrion	26.7	30.46
PGSC0003DMT400032365	Potato	plastid	26.7	30.29
PGSC0003DMT400050795	Potato	vacuole	13.6	23.58

Protein Annotations

EntrezGene:102590435	MapMan:21.4.1.1.5.3	Gene3D:3.90.550.50	InterPro:DUF4094	GO:GO:0000139	GO:GO:0003674
GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005794
GO:GO:0005975	GO:GO:0006464	GO:GO:0006486	GO:GO:0008150	GO:GO:0008152	GO:GO:0008378
GO:GO:0009058	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016740	GO:GO:0016757
GO:GO:0019538	InterPro:Glyco_trans_31	UniProt:M1AGW0	PFAM:PF01762	PFAM:PF13334	EnsemblPlantsGene:PGSC0003DMG400008736
PGSC:PGSC0003DMG400008736	EnsemblPlants:PGSC0003DMT400022537	PANTHER:PTHR11214	PANTHER:PTHR11214:SF208	TMHMM:TMhelix	UniParc:UPI000295C757
RefSeq:XP_006351966.1	SEG:seg	:	:	:	:

Description

Galactosyltransferase family protein [Source:PGSC_GENE;Acc:PGSC0003DMG400008736]

Coordinates

chr12:-:6518133..6522239

Molecular Weight (calculated)

45189.1 Da

IEP (calculated)

8.464

GRAVY (calculated)

-0.350

Length

397 amino acids

Sequence
(BLAST)

001: MYFKNRGAIE RPSTSVVSKK WSLFLCLGSF CAGMFFTNRM WIISETESGI TRTTTVEAER LKLVSEGCIT KFLQQQDIKL VSKDNFGILD KTISNLEIEL
101: AEAKAAHESI LSGIPISEEI EKGESRSKRK YFMVVGINTA FSSRKRRDSV RATWMPQGEK RRKLEEEKGI IIRFVIGHSA TLGGILDKAI EAEDKKHGDF
201: LRLDHIEGYL ELSAKTKTYF ATAVNLWDAE YYIKVDDDVH VNIATLVETL ARHRTKPRIY IGCMKSGPVL SRKGVRYHEP EYWKFGDKYF RHATGQIYAI
301: SKDLATYISA NQHVLHKYTN EDVSLGSWFI GLDVQHIDDR RLCCGTPPDC EWKAQAGNVC VASFDWTCSG ICRSVDRMKE VHRHCGEGEN ALWKAAF

Best Arabidopsis Sequence Match ( AT1G05170.2 )
(BLAST)

001: MSAKIKGEYS SRSFVSRKWT ILLCLGSFCV GMFFTNRMWN IPESKGMSHP SVTEAERLKL VSEGCNPKAL YQKEVKRDPQ ALFGEVANTH IALQTLDKTI
101: SSLEMELAAA RSVQESLQNG APLSDDMGKK QPQEQRRFLM VVGINTAFSS RKRRDSIRAT WMPQGEKRKR LEEEKGIIIR FVIGHSATTG GILDRAIEAE
201: DRKHGDFLRL DHVEGYLELS GKTKTYFSTA FSMWDADFYV KVDDDVHVNI ATLGETLVRH RKKPRVYIGC MKSGPVLSQK GVRYHEPEYW KFGENGNKYF
301: RHATGQLYAI SRDLASYISI NQHVLHKYAN EDVSLGAWFI GIDVKHIDDR RLCCGTPPDC EWKAQAGNIC VASFDWSCSG ICRSADRIKE VHRRCGEGEK
401: ALWSATF

Arabidopsis Description

B3GALT2Hexosyltransferase (Fragment) [Source:UniProtKB/TrEMBL;Acc:W8Q3U9]
SUBAcon: [golgi,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.