CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, golgi

Predictor Summary:

nucleus 1
plastid 2
mitochondrion 2
golgi 3
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 3
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, plasma membrane
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	golgi
Plant-mPloc:	plastid
Predotar:	mitochondrion
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH22570	Soybean	golgi	97.79	97.79
KRH56140	Soybean	golgi, mitochondrion	86.24	86.24
KRH25371	Soybean	golgi, mitochondrion	84.77	84.98
VIT_12s0059g00640.t01	Wine grape	golgi	83.78	83.78
Solyc07g052320.2.1	Tomato	mitochondrion, plastid	80.1	79.9
PGSC0003DMT400074517	Potato	cytosol, golgi, mitochondrion, vacuole	79.85	79.66
PGSC0003DMT400022537	Potato	plastid	76.41	78.34
Solyc12g005880.1.1	Tomato	plastid	75.43	77.72
AT1G05170.2	Thale cress	cytosol, golgi	77.4	77.4
GSMUA_Achr4P33450_001	Banana	golgi	76.41	77.17
Bra005595.1-P	Field mustard	golgi	76.9	76.53
CDY48266	Canola	golgi	76.9	76.53
CDY12206	Canola	golgi	76.66	76.28
GSMUA_Achr7P00260_001	Banana	golgi	75.92	76.11
CDY49507	Canola	plastid	76.66	76.1
AT2G32430.1	Thale cress	golgi	76.41	76.04
CDY46836	Canola	plastid	75.68	75.68
GSMUA_Achr4P23710_001	Banana	golgi	76.66	75.54
Os03t0577500-01	Rice	golgi, peroxisome, plastid	73.46	73.65
EER91307	Sorghum	golgi, peroxisome, plasma membrane	73.22	72.86
TraesCS7B01G241500.2	Wheat	cytosol, golgi, mitochondrion, nucleus	70.02	71.25
HORVU7Hr1G081720.2	Barley	cytosol	69.78	71.18
Bra015395.1-P	Field mustard	plastid	74.45	71.13
TraesCS7A01G330900.1	Wheat	cytosol, golgi, mitochondrion, plastid	69.78	71.0
TraesCS7D01G339200.1	Wheat	cytosol, golgi, mitochondrion, plastid	69.53	70.75
KRH02065	Soybean	golgi, mitochondrion	64.62	70.32
Zm00001d013804_P003	Maize	golgi, plastid, vacuole	71.74	70.19
KRH51094	Soybean	cytosol	59.46	70.14
KRH53153	Soybean	vacuole	61.67	63.71
KRH64756	Soybean	golgi	61.92	63.48
KRH16620	Soybean	mitochondrion	61.92	63.48
KRH18826	Soybean	endoplasmic reticulum	61.43	62.97
KRH23776	Soybean	golgi, vacuole	54.55	58.73
KRH40026	Soybean	golgi	55.04	58.64
KRH53422	Soybean	mitochondrion	35.14	41.69
KRH64518	Soybean	mitochondrion	34.4	40.82
KRH27862	Soybean	mitochondrion	34.4	40.82
KRH05191	Soybean	mitochondrion, plastid	29.98	38.24
KRH15831	Soybean	mitochondrion	33.91	34.59
KRH21986	Soybean	mitochondrion	26.04	31.55
KRH55102	Soybean	plastid	24.32	29.29
KRH26222	Soybean	plastid	24.32	29.29

Protein Annotations

EntrezGene:100793931	MapMan:21.4.1.1.5.3	Gene3D:3.90.550.50	EMBL:ACUP02007745	ncoils:Coil	InterPro:DUF4094
EnsemblPlantsGene:GLYMA_12G193600	GO:GO:0000139	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005794	GO:GO:0005975	GO:GO:0006464	GO:GO:0006486
GO:GO:0008150	GO:GO:0008152	GO:GO:0008378	GO:GO:0009058	GO:GO:0009987	GO:GO:0016020
GO:GO:0016021	GO:GO:0016740	GO:GO:0016757	GO:GO:0019538	InterPro:Glyco_trans_31	UniProt:I1LU50
EnsemblPlants:KRH26781	ProteinID:KRH26781	ProteinID:KRH26781.1	PFAM:PF01762	PFAM:PF13334	PANTHER:PTHR11214
PANTHER:PTHR11214:SF208	SUPFAM:SSF161270	TMHMM:TMhelix	UniParc:UPI000233C2BF	SEG:seg	:

Description

hypothetical protein

Coordinates

chr12:-:35513482..35517236

Molecular Weight (calculated)

46091.2 Da

IEP (calculated)

8.825

GRAVY (calculated)

-0.442

Length

407 amino acids

Sequence
(BLAST)

001: MTWKSRGDLL PKSVMSQKWM IFLCVGSFCA GMFFTNRMWT IPEPKGLART TAMEAEKLNV VSEGCNSRIL QEKEVKRETK GIYSEVFKTQ NAIQTLDKTI
101: SNLEMELAAA KAAQESIRSG APVAEDIKMS ESSGRRRYLM VVGINTAFSS RKRRDSVRET WMPQGEKRKK LEEEKGIIIR FVIGHSATSG GILDRAIEAE
201: DRKHGDFLRL DHVEGYLELS AKTKTYFATA VNLWDADFYI KVDDDVHVNI ATLGQTLLRH RSKPRVYIGC MKSGPVLSQK GVRYHEPEYW KFGEAGNKYF
301: RHATGQLYAI SKDLATYISN NKHVLHKYAN EDVSLGSWFI GLDVDHIDDR RLCCGTPPDC EWKAQAGNVC VASFDWTCSG ICRSAERIKE VHKRCGEGEK
401: ALWNASF

Best Arabidopsis Sequence Match ( AT1G05170.2 )
(BLAST)

001: MSAKIKGEYS SRSFVSRKWT ILLCLGSFCV GMFFTNRMWN IPESKGMSHP SVTEAERLKL VSEGCNPKAL YQKEVKRDPQ ALFGEVANTH IALQTLDKTI
101: SSLEMELAAA RSVQESLQNG APLSDDMGKK QPQEQRRFLM VVGINTAFSS RKRRDSIRAT WMPQGEKRKR LEEEKGIIIR FVIGHSATTG GILDRAIEAE
201: DRKHGDFLRL DHVEGYLELS GKTKTYFSTA FSMWDADFYV KVDDDVHVNI ATLGETLVRH RKKPRVYIGC MKSGPVLSQK GVRYHEPEYW KFGENGNKYF
301: RHATGQLYAI SRDLASYISI NQHVLHKYAN EDVSLGAWFI GIDVKHIDDR RLCCGTPPDC EWKAQAGNIC VASFDWSCSG ICRSADRIKE VHRRCGEGEK
401: ALWSATF

Arabidopsis Description

B3GALT2Hexosyltransferase (Fragment) [Source:UniProtKB/TrEMBL;Acc:W8Q3U9]
SUBAcon: [golgi,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.