Subcellular Localization
min:
: max
Winner_takes_all: golgi
Predictor Summary:
Predictor Summary:
- plastid 2
- extracellular 4
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 4
- golgi 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc08g069060.2.1 | Tomato | nucleus | 97.22 | 97.22 |
| PGSC0003DMT400075526 | Potato | cytosol | 65.4 | 79.2 |
| VIT_07s0031g03090.t01 | Wine grape | golgi | 70.71 | 70.53 |
| PGSC0003DMT400071429 | Potato | golgi | 68.94 | 68.94 |
| Zm00001d016891_P001 | Maize | plasma membrane | 66.67 | 66.33 |
| OQU85173 | Sorghum | golgi, nucleus | 66.16 | 65.83 |
| Os02t0566800-01 | Rice | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole | 63.64 | 64.78 |
| GSMUA_Achr5P23050_001 | Banana | cytosol, golgi, mitochondrion, plastid | 65.15 | 64.5 |
| TraesCS6D01G187900.1 | Wheat | golgi | 64.65 | 64.48 |
| TraesCS6A01G201400.2 | Wheat | golgi | 64.39 | 64.23 |
| TraesCS6B01G227300.1 | Wheat | golgi | 64.14 | 63.98 |
| Os09t0452900-01 | Rice | golgi | 63.13 | 63.61 |
| TraesCS5B01G233700.1 | Wheat | golgi | 61.87 | 62.03 |
| TraesCS5D01G242400.1 | Wheat | golgi | 61.62 | 61.77 |
| KXG35748 | Sorghum | golgi | 60.35 | 60.66 |
| GSMUA_Achr8P23200_001 | Banana | golgi | 64.9 | 60.19 |
| Zm00001d000099_P003 | Maize | golgi | 63.64 | 59.72 |
| PGSC0003DMT400074517 | Potato | cytosol, golgi, mitochondrion, vacuole | 61.36 | 59.56 |
| PGSC0003DMT400071658 | Potato | golgi | 57.83 | 58.72 |
| PGSC0003DMT400057471 | Potato | golgi | 59.34 | 57.6 |
| Zm00001d020692_P002 | Maize | golgi, mitochondrion | 60.1 | 57.49 |
| PGSC0003DMT400082760 | Potato | golgi | 57.58 | 57.29 |
| PGSC0003DMT400022537 | Potato | plastid | 57.32 | 57.18 |
| TraesCS5A01G235300.4 | Wheat | golgi | 61.11 | 56.94 |
| HORVU6Hr1G052140.8 | Barley | plastid | 65.4 | 54.99 |
| HORVU5Hr1G067750.1 | Barley | plastid | 61.62 | 50.31 |
| PGSC0003DMT400032067 | Potato | cytosol, mitochondrion | 33.84 | 42.81 |
| PGSC0003DMT400051332 | Potato | extracellular, plasma membrane, vacuole | 23.99 | 42.04 |
| PGSC0003DMT400023412 | Potato | mitochondrion | 31.82 | 35.9 |
| PGSC0003DMT400050795 | Potato | vacuole | 19.7 | 34.06 |
| PGSC0003DMT400054913 | Potato | golgi, mitochondrion | 28.79 | 32.76 |
| PGSC0003DMT400032365 | Potato | plastid | 27.53 | 31.14 |
Protein Annotations
| EntrezGene:102605545 | MapMan:21.4.1.1.5.3 | Gene3D:3.90.550.50 | InterPro:DUF4094 | GO:GO:0000139 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005794 |
| GO:GO:0005975 | GO:GO:0006464 | GO:GO:0006486 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008378 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016740 | GO:GO:0016757 |
| GO:GO:0019538 | InterPro:Glyco_trans_31 | UniProt:M1CVZ9 | PFAM:PF01762 | PFAM:PF13334 | EnsemblPlantsGene:PGSC0003DMG400029547 |
| PGSC:PGSC0003DMG400029547 | EnsemblPlants:PGSC0003DMT400075963 | PANTHER:PTHR11214 | PANTHER:PTHR11214:SF221 | TMHMM:TMhelix | UniParc:UPI000294C6B5 |
| RefSeq:XP_006355190.1 | : | : | : | : | : |
Description
Beta-1,3-galactosyltransferase sqv-2 [Source:PGSC_GENE;Acc:PGSC0003DMG400029547]
Coordinates
chr8:+:44819551..44824719
Molecular Weight (calculated)
44684.4 Da
IEP (calculated)
8.543
GRAVY (calculated)
-0.400
Length
396 amino acids
Sequence
(BLAST)
(BLAST)
001: MKNRNRGKIS TKWIAILCIF SFVLGMLFSN RVWTPPESDG RNIFGRRQTQ ERDLPSVSDD CETKNSQKEE MMGEFNKAQV AIQSLDDSIA KIQSELPSTK
101: DPLIPRITEE VPSLSTNSGG SGTRKKTFMV IGINTAFSSR KRRDSIRETW MPQGAKLHRL EREKGIVVRF MIGHSAISNS ILDRAIDSED AQHNDILRLD
201: HIEGYHELTA KTKAFFSLAV AKWDAEFYVK IDDDVHVNLG TLAATLARHR LKPRVYIGCM KSGSVLYQKS VKYHEPEFWK FGETGNKYFR HATGQIYAIS
301: KELATYVANN RPILHKYANE DVSLGAWLIG LEVEHIDDRN LCCGTPPECE WKAQAGNVCV ASFDWSCSGI CKSVERIKHV HAKCSESPAT LWGALI
101: DPLIPRITEE VPSLSTNSGG SGTRKKTFMV IGINTAFSSR KRRDSIRETW MPQGAKLHRL EREKGIVVRF MIGHSAISNS ILDRAIDSED AQHNDILRLD
201: HIEGYHELTA KTKAFFSLAV AKWDAEFYVK IDDDVHVNLG TLAATLARHR LKPRVYIGCM KSGSVLYQKS VKYHEPEFWK FGETGNKYFR HATGQIYAIS
301: KELATYVANN RPILHKYANE DVSLGAWLIG LEVEHIDDRN LCCGTPPECE WKAQAGNVCV ASFDWSCSGI CKSVERIKHV HAKCSESPAT LWGALI
001: MKHKVSKRVI SLKWVPFLCI SFFALGAIFT SRSWEPSSDS GSQLISQHHR DHELQIVSDD CAHNKKATQE KDVTGEVLRT HEAIQSLDKS VSTLSSTRSS
101: QEMVDGSETN PRKKVFMVMG INTAFSSRKR RDSVRETWMP QGEKLERLEQ EKGIVIKFMI GHSATSNSIL DRAIDSEDAQ HKDFLRLEHV EGYHELSAKT
201: KIFFSTAVAK WDAEFYIKVD DDVHVNLGML ASTLARHRSK PRVYIGCMKS GPVLAQKTVK YHEPEYWKFG EDGNKYFRHA TGQIYAISKD LANYISINQP
301: ILHKYANEDV SLGSWFIGLE VEHIDDRNFC CGTPPDCRWK AEAGDVCVAS FEWSCSGICK SVERMKIVHE VCSEGEGAVW NTLL
101: QEMVDGSETN PRKKVFMVMG INTAFSSRKR RDSVRETWMP QGEKLERLEQ EKGIVIKFMI GHSATSNSIL DRAIDSEDAQ HKDFLRLEHV EGYHELSAKT
201: KIFFSTAVAK WDAEFYIKVD DDVHVNLGML ASTLARHRSK PRVYIGCMKS GPVLAQKTVK YHEPEYWKFG EDGNKYFRHA TGQIYAISKD LANYISINQP
301: ILHKYANEDV SLGSWFIGLE VEHIDDRNFC CGTPPDCRWK AEAGDVCVAS FEWSCSGICK SVERMKIVHE VCSEGEGAVW NTLL
Arabidopsis Description
Hexosyltransferase [Source:UniProtKB/TrEMBL;Acc:A0A178WEM8]
SUBAcon: [golgi]
SUBAcon: [golgi]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.