Factsheet for GSMUA_Achr8P23200_001

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

nucleus 1
mitochondrion 2
golgi 4
peroxisome 1
plastid 1
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	cytosol, mitochondrion, nucleus, peroxisome, plastid, secretory
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	golgi
Plant-mPloc:	peroxisome, plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr5P23050_001	Banana	cytosol, golgi, mitochondrion, plastid	76.35	81.5
Zm00001d016891_P001	Maize	plasma membrane	75.18	80.65
OQU85173	Sorghum	golgi, nucleus	74.71	80.15
Os02t0566800-01	Rice	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole	71.19	78.15
VIT_18s0001g04150.t01	Wine grape	golgi	72.13	77.58
TraesCS6A01G201400.2	Wheat	golgi	71.9	77.33
TraesCS6D01G187900.1	Wheat	golgi	71.9	77.33
TraesCS6B01G227300.1	Wheat	golgi	71.66	77.08
VIT_07s0031g03090.t01	Wine grape	golgi	70.73	76.07
KRH16620	Soybean	mitochondrion	70.26	75.57
KRH18826	Soybean	endoplasmic reticulum	69.79	75.06
Solyc11g013490.1.1	Tomato	golgi	69.09	74.49
PGSC0003DMT400071429	Potato	golgi	69.09	74.49
KRH53153	Soybean	vacuole	68.38	74.11
KRH64756	Soybean	golgi	68.85	74.06
Zm00001d000099_P003	Maize	golgi	72.6	73.46
AT1G77810.1	Thale cress	golgi	65.11	71.83
TraesCS5B01G233700.1	Wheat	golgi	66.28	71.65
Os09t0452900-01	Rice	golgi	65.81	71.5
TraesCS5D01G242400.1	Wheat	golgi	65.81	71.14
KXG35748	Sorghum	golgi	64.4	69.8
CDX87501	Canola	golgi	62.06	69.19
Bra015654.1-P	Field mustard	golgi	62.06	69.19
PGSC0003DMT400075526	Potato	cytosol	52.93	69.11
CDX88390	Canola	golgi	61.83	69.11
Solyc12g096440.1.1	Tomato	cytosol	41.45	67.82
Zm00001d020692_P002	Maize	golgi, mitochondrion	65.57	67.63
HORVU6Hr1G052140.8	Barley	plastid	73.3	66.45
TraesCS5A01G235300.4	Wheat	golgi	66.04	66.35
CDX96559	Canola	cytosol, nucleus, peroxisome	54.1	66.19
Bra031357.1-P	Field mustard	cytosol	51.29	65.57
Solyc08g069060.2.1	Tomato	nucleus	60.42	65.15
PGSC0003DMT400075963	Potato	golgi	60.19	64.9
CDY04694	Canola	golgi	55.27	63.1
CDY30641	Canola	golgi	54.57	62.3
Bra016393.1-P	Field mustard	golgi	56.44	61.79
CDY38836	Canola	golgi	56.44	61.79
AT1G22015.1	Thale cress	golgi	56.91	61.06
GSMUA_Achr4P33450_001	Banana	golgi	57.61	61.04
GSMUA_Achr5P00690_001	Banana	golgi	56.91	60.6
CDY00412	Canola	golgi	55.97	60.2
GSMUA_Achr4P23710_001	Banana	golgi	58.08	60.05
GSMUA_Achr8P08420_001	Banana	cytosol	55.5	60.0
Bra012302.1-P	Field mustard	golgi	54.8	58.94
GSMUA_Achr7P00260_001	Banana	golgi	55.97	58.87
HORVU5Hr1G067750.1	Barley	plastid	65.57	57.73
GSMUA_Achr11P...	Banana	golgi	55.04	56.76
CDY01303	Canola	golgi	51.29	56.74
GSMUA_Achr9P30290_001	Banana	cytosol	55.97	56.64
GSMUA_Achr4P00940_001	Banana	mitochondrion	33.96	43.03
PGSC0003DMT400051332	Potato	extracellular, plasma membrane, vacuole	18.27	34.51
GSMUA_Achr8P24200_001	Banana	cytosol	28.81	34.17
GSMUA_Achr7P14080_001	Banana	golgi, plastid	25.29	31.4
GSMUA_Achr10P...	Banana	mitochondrion	21.31	29.55
GSMUA_Achr6P05430_001	Banana	endoplasmic reticulum, nucleus, plastid	25.53	28.99
PGSC0003DMT400050795	Potato	vacuole	13.82	25.76

Protein Annotations

MapMan:21.4.1.1.5.3	Gene3D:3.90.550.50	InterPro:DUF4094	GO:GO:0000139	GO:GO:0003674	GO:GO:0003824
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005794	GO:GO:0005975
GO:GO:0006464	GO:GO:0006486	GO:GO:0008150	GO:GO:0008152	GO:GO:0008378	GO:GO:0009058
GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016740	GO:GO:0016757	GO:GO:0019538
EnsemblPlantsGene:GSMUA_Achr8G23200_001	EnsemblPlants:GSMUA_Achr8P23200_001	EnsemblPlants:GSMUA_Achr8T23200_001	InterPro:Glyco_trans_31	UniProt:M0TSX3	PFAM:PF01762
PFAM:PF13334	PANTHER:PTHR11214	PANTHER:PTHR11214:SF74	TMHMM:TMhelix	UniParc:UPI000294F4FA	:

Description

Beta-1,3-galactosyltransferase 7 [Source:GMGC_GENE;Acc:GSMUA_Achr8G23200_001]

Coordinates

chr8:-:27721345..27725412

Molecular Weight (calculated)

48469.6 Da

IEP (calculated)

7.529

GRAVY (calculated)

-0.377

Length

427 amino acids

Sequence
(BLAST)

001: MRGRSGGCDR RVSFRWIVIL CLCSFALGIL LTDKFWTVPD VNNPIVSSRR KTEQELQIIS EDCTTKRKHA DDKDVMGEVT RTHEAIQSLD KAISTLQMEL
101: AAKRSARELI SEDGSPSIDA SRRPRKKAFV VIGINTAFSS RKRRDSVRAT WMPQGEKLQQ LEREKGIVVR FMIGHRQVKE DFCIFSDPSC FHSILFLNQF
201: HLNYSNATSH SILDKAIDSE EAQHNDFLRL AHVEGYHELS AKTKIFFSTA VATWDAEFYV KVDDDVHLNL GMLATTLARH RSKPRTYIGC MKSGPVLSDK
301: NVKYHEPEYW KFGEEGNKYF RHATGQIYAV SKDLATYISI NHPILHKYAN EDVSLGSWFI GLEVEHIDER SMCCGTPPDC EWKAQAGNVC IASFDWSCSG
401: ICKSVEKIKD VHERCGEGDG AVWSALF

Best Arabidopsis Sequence Match ( AT1G77810.2 )
(BLAST)

001: MKHKVSKRVI SLKWVPFLCI SFFALGAIFT SRSWEPSSDS GSQLISQHHR DHELQIVSDD CAHNKKATQE KDVTGEVLRT HEAIQSLDKS VSTLSSTRSS
101: QEMVDGSETN PRKKVFMVMG INTAFSSRKR RDSVRETWMP QGEKLERLEQ EKGIVIKFMI GHSATSNSIL DRAIDSEDAQ HKDFLRLEHV EGYHELSAKT
201: KIFFSTAVAK WDAEFYIKVD DDVHVNLGML ASTLARHRSK PRVYIGCMKS GPVLAQKTVK YHEPEYWKFG EDGNKYFRHA TGQIYAISKD LANYISINQP
301: ILHKYANEDV SLGSWFIGLE VEHIDDRNFC CGTPPDCRWK AEAGDVCVAS FEWSCSGICK SVERMKIVHE VCSEGEGAVW NTLL

Arabidopsis Description

Hexosyltransferase [Source:UniProtKB/TrEMBL;Acc:A0A178WEM8]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.