Factsheet for GSMUA_Achr9P30290_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
mitochondrion 2
golgi 1
plastid 1
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr5P00690_001	Banana	golgi	81.75	86.03
Os02t0164300-02	Rice	cytosol	35.07	81.32
GSMUA_Achr4P33450_001	Banana	golgi	67.54	70.72
GSMUA_Achr7P00260_001	Banana	golgi	67.06	69.7
GSMUA_Achr4P23710_001	Banana	golgi	67.77	69.25
Zm00001d053825_P002	Maize	golgi	65.4	68.66
EES04570	Sorghum	golgi	65.4	68.66
HORVU7Hr1G105510.13	Barley	golgi	63.74	68.1
VIT_10s0116g01710.t01	Wine grape	cytosol	65.64	67.89
TraesCS7D01G446600.1	Wheat	golgi	63.74	67.76
KRH51094	Soybean	cytosol	55.21	67.54
TraesCS7A01G458600.1	Wheat	golgi	63.98	67.0
HORVU6Hr1G026680.2	Barley	golgi	62.8	66.25
EER88815	Sorghum	golgi	62.8	66.25
TraesCS7B01G358000.2	Wheat	golgi	63.98	66.01
TraesCS6D01G127200.1	Wheat	golgi	62.56	66.0
TraesCS6B01G166400.1	Wheat	golgi	62.56	66.0
TraesCS6A01G138100.1	Wheat	golgi	62.56	66.0
Os06t0679500-01	Rice	golgi	61.61	65.82
KRH02065	Soybean	golgi, mitochondrion	58.29	65.78
Zm00001d014361_P001	Maize	golgi	61.61	62.35
GSMUA_Achr5P23050_001	Banana	cytosol, golgi, mitochondrion, plastid	57.11	60.25
AT1G11730.1	Thale cress	golgi, mitochondrion	54.74	60.16
CDX97981	Canola	mitochondrion	54.03	58.31
Bra019835.1-P	Field mustard	mitochondrion	53.55	57.8
CDY49800	Canola	mitochondrion	53.55	57.8
GSMUA_Achr8P23200_001	Banana	golgi	56.64	55.97
GSMUA_Achr8P08420_001	Banana	cytosol	50.0	53.42
GSMUA_Achr11P...	Banana	golgi	51.18	52.17
GSMUA_Achr4P00940_001	Banana	mitochondrion	32.94	41.25
GSMUA_Achr8P24200_001	Banana	cytosol	30.33	35.56
GSMUA_Achr7P14080_001	Banana	golgi, plastid	25.12	30.81
GSMUA_Achr10P...	Banana	mitochondrion	20.85	28.57
GSMUA_Achr6P05430_001	Banana	endoplasmic reticulum, nucleus, plastid	24.17	27.13

Protein Annotations

MapMan:21.4.1.1.5.3	Gene3D:3.90.550.50	ncoils:Coil	InterPro:DUF4094	GO:GO:0000139	GO:GO:0003674
GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005794
GO:GO:0005975	GO:GO:0006464	GO:GO:0006486	GO:GO:0008150	GO:GO:0008152	GO:GO:0008378
GO:GO:0009058	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016740	GO:GO:0016757
GO:GO:0019538	EnsemblPlantsGene:GSMUA_Achr9G30290_001	EnsemblPlants:GSMUA_Achr9P30290_001	EnsemblPlants:GSMUA_Achr9T30290_001	InterPro:Glyco_trans_31	UniProt:M0U4T6
PFAM:PF01762	PFAM:PF13334	PANTHER:PTHR11214	PANTHER:PTHR11214:SF208	TMHMM:TMhelix	UniParc:UPI00029644C6
SEG:seg	:	:	:	:	:

Description

Probable beta-1,3-galactosyltransferase 2 [Source:GMGC_GENE;Acc:GSMUA_Achr9G30290_001]

Coordinates

chr9:-:33613341..33618678

Molecular Weight (calculated)

47982.6 Da

IEP (calculated)

8.256

GRAVY (calculated)

-0.449

Length

422 amino acids

Sequence
(BLAST)

001: MPQQQQMSGD LRMSLRPTKE VVMSSKSKGG DTVARRWTLL LCLGSFVTGL LFTNRMWTVP EAKDIIRANK AKEHREELVV EGYYSKIMDQ KEEARKILGE
101: EGSTTEDDLQ MLNKAISNLE MELAAAKMAQ ESILKGSPIP QELKVIKTRR HKYFMVIGIN TAFNSRKRRD SVRDTWMPQG EKRKKLEEEK GIVIRFVIGH
201: GATSGGILDR SVEAEDKKHG DFLRLNHVEG YLELSAKTKT YFATAFSLWD AEFYVKVDDD VHVNIATLGN TLARHRLKPR VYIGCMKCGP VLARKGVRYY
301: EPEHWKFGGD GNKYFRHATG QLYAISNELA AYISINQHIL HKYVNEDVSL GSWFIGLDVE HIDDRKLCCG TLPDCEWKAQ AGNTCVASFD WSCSGICDSV
401: DRIKEVHQRC GENESTIWNA VF

Best Arabidopsis Sequence Match ( AT1G05170.2 )
(BLAST)

001: MSAKIKGEYS SRSFVSRKWT ILLCLGSFCV GMFFTNRMWN IPESKGMSHP SVTEAERLKL VSEGCNPKAL YQKEVKRDPQ ALFGEVANTH IALQTLDKTI
101: SSLEMELAAA RSVQESLQNG APLSDDMGKK QPQEQRRFLM VVGINTAFSS RKRRDSIRAT WMPQGEKRKR LEEEKGIIIR FVIGHSATTG GILDRAIEAE
201: DRKHGDFLRL DHVEGYLELS GKTKTYFSTA FSMWDADFYV KVDDDVHVNI ATLGETLVRH RKKPRVYIGC MKSGPVLSQK GVRYHEPEYW KFGENGNKYF
301: RHATGQLYAI SRDLASYISI NQHVLHKYAN EDVSLGAWFI GIDVKHIDDR RLCCGTPPDC EWKAQAGNIC VASFDWSCSG ICRSADRIKE VHRRCGEGEK
401: ALWSATF

Arabidopsis Description

B3GALT2Hexosyltransferase (Fragment) [Source:UniProtKB/TrEMBL;Acc:W8Q3U9]
SUBAcon: [golgi,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.