Factsheet for VIT_10s0116g01710.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
mitochondrion 2
golgi 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	golgi
Plant-mPloc:	plastid
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os02t0164300-02	Rice	cytosol	35.78	80.22
VIT_19s0090g00560.t01	Wine grape	cytosol, golgi	78.43	79.01
VIT_12s0059g00640.t01	Wine grape	golgi	77.45	77.64
KRH51094	Soybean	cytosol	61.27	72.46
KRH02065	Soybean	golgi, mitochondrion	66.42	72.46
GSMUA_Achr5P00690_001	Banana	golgi	69.85	71.07
Zm00001d053825_P002	Maize	golgi	67.16	68.16
EES04570	Sorghum	golgi	67.16	68.16
HORVU6Hr1G026680.2	Barley	golgi	65.93	67.25
TraesCS6D01G127200.1	Wheat	golgi	65.69	67.0
TraesCS6B01G166400.1	Wheat	golgi	65.69	67.0
TraesCS6A01G138100.1	Wheat	golgi	65.69	67.0
AT1G11730.1	Thale cress	golgi, mitochondrion	62.99	66.93
HORVU7Hr1G105510.13	Barley	golgi	64.71	66.84
TraesCS7D01G446600.1	Wheat	golgi	64.95	66.75
EER88815	Sorghum	golgi	64.95	66.25
Os06t0679500-01	Rice	golgi	63.97	66.08
GSMUA_Achr9P30290_001	Banana	cytosol	67.89	65.64
TraesCS7A01G458600.1	Wheat	golgi	64.71	65.51
VIT_07s0031g03090.t01	Wine grape	golgi	63.24	64.99
TraesCS7B01G358000.2	Wheat	golgi	64.95	64.79
VIT_18s0001g04150.t01	Wine grape	golgi	62.99	64.74
CDY49800	Canola	mitochondrion	61.52	64.19
CDX97981	Canola	mitochondrion	61.27	63.94
Bra019835.1-P	Field mustard	mitochondrion	61.27	63.94
VIT_18s0089g01040.t01	Wine grape	endoplasmic reticulum, golgi	60.29	62.92
Zm00001d014361_P001	Maize	golgi	63.48	62.11
VIT_02s0025g02830.t01	Wine grape	golgi	59.8	60.25
VIT_02s0025g01010.t01	Wine grape	mitochondrion	36.27	43.4
VIT_16s0050g02460.t01	Wine grape	mitochondrion	34.31	40.94
VIT_04s0008g06480.t01	Wine grape	golgi	33.82	40.71
VIT_13s0158g00110.t01	Wine grape	cytosol	7.6	33.7
VIT_19s0014g01490.t01	Wine grape	golgi, mitochondrion, plastid	26.72	31.32
VIT_04s0008g01270.t01	Wine grape	plastid	25.49	28.81

Protein Annotations

EntrezGene:100259024	wikigene:100259024	MapMan:21.4.1.1.5.3	Gene3D:3.90.550.50	ProteinID:CBI23239	ProteinID:CBI23239.3
ncoils:Coil	InterPro:DUF4094	UniProt:E0CVS8	EMBL:FN595248	GO:GO:0000139	GO:GO:0003674
GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005794
GO:GO:0005975	GO:GO:0006464	GO:GO:0006486	GO:GO:0008150	GO:GO:0008152	GO:GO:0008378
GO:GO:0009058	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016740	GO:GO:0016757
GO:GO:0019538	InterPro:Glyco_trans_31	EntrezGene:LOC100259024	wikigene:LOC100259024	PFAM:PF01762	PFAM:PF13334
PANTHER:PTHR11214	PANTHER:PTHR11214:SF150	TMHMM:TMhelix	UniParc:UPI0001BE2222	ArrayExpress:VIT_10s0116g01710	EnsemblPlantsGene:VIT_10s0116g01710
EnsemblPlants:VIT_10s0116g01710.t01	RefSeq:XP_002269104	RefSeq:XP_002269104.2	RefSeq:XP_010655390.1	SEG:seg	:

Description

Hexosyltransferase [Source:UniProtKB/TrEMBL;Acc:E0CVS8]

Coordinates

chr10:-:964280..971029

Molecular Weight (calculated)

45960.0 Da

IEP (calculated)

8.463

GRAVY (calculated)

-0.379

Length

408 amino acids

Sequence
(BLAST)

001: MYLKNRGGTE YPSKSVVSRN LALLLCLSSF CAGMFFTNRM WAAFEAKDTE RMTGIKDERI KLASEGCTPK LASKVIRHKS NNILGEVSKT HHAVQTLDKT
101: ISNLEMELAA ARAAQESVLN DSLISEDHNV AESTKKRKYL MVIGINTAFS SRKRRDSVRA TWMPQGEKRK KLEEEKGIVI RFVIGHSSTS GGILDKAIEA
201: EERMHGDFLR LDHVEGYLEL SGKTKTYFST AVALWDADFY VKVDDDVHVN IGTLAMTLAQ YRLQPRVYIG CMKSGPVLAQ KGVKYHEPEY WKFGEEGNKY
301: FRHATGQLYA ISKNLATYIS INRHVLHKYA NEDVSLGSWF IGLDVEHIDD RRLCCGTPPD CEWKAEAGNV CVASFDWSCS GICRSSERMK DVHQRCGEGK
401: NALWSAVF

Best Arabidopsis Sequence Match ( AT1G05170.2 )
(BLAST)

001: MSAKIKGEYS SRSFVSRKWT ILLCLGSFCV GMFFTNRMWN IPESKGMSHP SVTEAERLKL VSEGCNPKAL YQKEVKRDPQ ALFGEVANTH IALQTLDKTI
101: SSLEMELAAA RSVQESLQNG APLSDDMGKK QPQEQRRFLM VVGINTAFSS RKRRDSIRAT WMPQGEKRKR LEEEKGIIIR FVIGHSATTG GILDRAIEAE
201: DRKHGDFLRL DHVEGYLELS GKTKTYFSTA FSMWDADFYV KVDDDVHVNI ATLGETLVRH RKKPRVYIGC MKSGPVLSQK GVRYHEPEYW KFGENGNKYF
301: RHATGQLYAI SRDLASYISI NQHVLHKYAN EDVSLGAWFI GIDVKHIDDR RLCCGTPPDC EWKAQAGNIC VASFDWSCSG ICRSADRIKE VHRRCGEGEK
401: ALWSATF

Arabidopsis Description

B3GALT2Hexosyltransferase (Fragment) [Source:UniProtKB/TrEMBL;Acc:W8Q3U9]
SUBAcon: [golgi,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.