Factsheet for VIT_04s0008g01270.t01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
mitochondrion 1
golgi 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_13s0158g00110.t01	Wine grape	cytosol	21.61	84.78
CDY42221	Canola	cytosol	30.19	83.85
Bra034289.1-P	Field mustard	plastid	70.08	69.7
CDX77030	Canola	plastid	70.08	69.7
CDY35316	Canola	plastid	69.81	69.42
AT2G26100.1	Thale cress	plastid	69.81	67.92
VIT_19s0014g01490.t01	Wine grape	golgi, mitochondrion, plastid	56.51	58.62
GSMUA_Achr6P05430_001	Banana	endoplasmic reticulum, nucleus, plastid	57.89	55.59
Os05t0199500-01	Rice	mitochondrion	55.96	51.79
TraesCS1A01G125600.1	Wheat	cytosol, golgi, peroxisome	52.91	50.8
TraesCS1B01G144600.1	Wheat	cytosol, golgi, peroxisome	52.63	50.53
TraesCS1D01G127900.1	Wheat	cytosol, golgi, peroxisome	52.35	50.27
Zm00001d009997_P001	Maize	plasma membrane	52.08	50.13
EES19194	Sorghum	golgi, peroxisome, plastid	51.8	49.87
HORVU1Hr1G029110.2	Barley	cytosol, plasma membrane, plastid	52.35	42.09
VIT_18s0089g01040.t01	Wine grape	endoplasmic reticulum, golgi	29.09	26.85
VIT_02s0025g01010.t01	Wine grape	mitochondrion	25.21	26.69
VIT_04s0008g06480.t01	Wine grape	golgi	24.38	25.96
VIT_07s0031g03090.t01	Wine grape	golgi	28.25	25.69
VIT_19s0090g00560.t01	Wine grape	cytosol, golgi	28.81	25.68
VIT_10s0116g01710.t01	Wine grape	cytosol	28.81	25.49
VIT_02s0025g02830.t01	Wine grape	golgi	27.98	24.94
VIT_18s0001g04150.t01	Wine grape	golgi	27.42	24.94
VIT_16s0050g02460.t01	Wine grape	mitochondrion	23.55	24.85
VIT_12s0059g00640.t01	Wine grape	golgi	27.7	24.57

Protein Annotations

EntrezGene:100257718	wikigene:100257718	MapMan:21.4.1.1.5.3	EMBL:AM444649	ProteinID:CAN63091	ProteinID:CAN63091.1
ProteinID:CBI20664	ProteinID:CBI20664.3	UniProt:D7STR5	EMBL:FN595231	GO:GO:0000139	GO:GO:0003674
GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005794
GO:GO:0005975	GO:GO:0006464	GO:GO:0006486	GO:GO:0008150	GO:GO:0008152	GO:GO:0008378
GO:GO:0009058	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016740	GO:GO:0016757
GO:GO:0019538	InterPro:Glyco_trans_31	InterPro:IPR029044	EntrezGene:LOC100257718	wikigene:LOC100257718	InterPro:Nucleotide-diphossugar_trans
PFAM:PF01762	PANTHER:PTHR11214	PANTHER:PTHR11214:SF85	SUPFAM:SSF53448	TIGR:TC53600	TMHMM:TMhelix
UniParc:UPI00015C8B70	ArrayExpress:VIT_04s0008g01270	EnsemblPlantsGene:VIT_04s0008g01270	EnsemblPlants:VIT_04s0008g01270.t01	unigene:Vvi.15440	RefSeq:XP_002279252
RefSeq:XP_002279252.1	SEG:seg	:	:	:	:

Description

Hexosyltransferase [Source:UniProtKB/TrEMBL;Acc:D7STR5]

Coordinates

chr4:+:1044898..1048909

Molecular Weight (calculated)

40615.1 Da

IEP (calculated)

9.530

GRAVY (calculated)

-0.247

Length

361 amino acids

Sequence
(BLAST)

001: MPRAASFLPL NSSSATTATT YSKDEKSKRP LLTTSTSNAR LPLLVFCFIS LTIGLAGTIF AVSALSRPRP LPVFRCGRIQ DTFRAFYSLS NPQPDLLDRP
101: KVLGFVGIQT GFSSASRRSA LRSTWFPSDP DGLLRLEQAT GLAFRFVIGR SKDVKKMAEL QKEVEKYKDF MLIDVREEYL NLPHKTLAFF KAAFELFDAD
201: YYVKADDDIY LRPDRLSTLL AKERSHSQTY IGCMKKGPVI TDPKMKWYEK SGHLIGNEYF LHAYGPIYVL SKEVVASLAA ARNNSLRMFN NEDVTIGSWM
301: LAMNVHHEDN RAICDPRCTP TSIAVWDIPK CSGLCNPTSR LKELHKMGMC SKSPTLPPDD R

Best Arabidopsis Sequence Match ( AT2G26100.1 )
(BLAST)

001: MPLFSHRFTT ASSSSPASPS YYNKPSSKTH KPNSSSSSYT SSRIHVAIIF FSLVSVFIGV AGTIFALSST GPASVYRCGG SKDTSRVVSA SRKLGGDGGN
101: NGVVVERRKL LGFVGIQTGF DSGDRRTALR STWFPSDPDS LLRLEQATGL AFRFVIGKSK DAKKMAELEK EIKEYRDFVL LDTEEEYIRL PYKTLAFFKA
201: AFKLFEADYY VKADDDIYLR PDRLATLLAN ERLHSQTYIG CMKKGPVITD PKLKWYEKQG NLIGNEYFLH AYGPIYVLSA EIVASLAAAR NGSLRMFNNE
301: DVTIGSWMLA MDVHHEDNRA LCDPHCSPKS IAVWDIPKCS GLCDPESRLK ELHKTDMCSK SPTLPPDDID Q

Arabidopsis Description

B3GALT12Hexosyltransferase [Source:UniProtKB/TrEMBL;Acc:A0A178VU65]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.